RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 BAP18Q8IXM2 172 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 SIGLECL1Q8N7X8 197 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 FANCD2OSQ96PS1 177 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 TMEM147Q9BVK8 224 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 WDR61Q9GZS3 305 aaKnown RBP8.17□□□□□ -1.1
TPM3-217ENST00000504663 ENY2Q9NPA8 101 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 ZC4H2Q9NQZ6 224 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 WDR83OSQ9Y284 106 aa8.17□□□□□ -1.1
TPM3-217ENST00000504663 LSM4Q9Y4Z0 139 aaKnown RBP8.17□□□□□ -1.1
TPM3-217ENST00000504663 IGLV11-55A0A075B6I3 123 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 IGKV1OR2-108A0A075B7D4 117 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 FNDC10F2Z333 226 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 I3L2K1 104 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 SOX15O60248 233 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 JTBO76095 146 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 IGHG2P01859 326 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 FAM157CP0CG43 387 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 SPP1P10451 314 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 BLCAPP62952 87 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 ERHP84090 104 aaKnown RBP8.16□□□□□ -1.1
TPM3-217ENST00000504663 CD69Q07108 199 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 MLANAQ16655 118 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 ATP6V1FQ16864 119 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 FAM74A1Q5RGS3 127 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 TREML4Q6UXN2 200 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 ZNF767PQ75MW2 155 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 HSD17B13Q7Z5P4 300 aaPredicted RBP8.16□□□□□ -1.1
TPM3-217ENST00000504663 TTC9CQ8N5M4 171 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 OR10P1Q8NGE3 313 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 OR1P1Q8NH06 330 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 OR5R1Q8NH85 324 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 SGMS2Q8NHU3 365 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 SCARB1Q8WTV0 552 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 PHYHIPLQ96FC7 376 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 ZNF414Q96IQ9 312 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 RASL11BQ9BPW5 248 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 GGACTQ9BVM4 153 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 ESM1Q9NQ30 184 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 YAE1D1Q9NRH1 226 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 VPREB3Q9UKI3 123 aa8.16□□□□□ -1.1
TPM3-217ENST00000504663 MTORP42345 2549 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 IGKV1D-37A0A075B6S9 117 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 UBE2L5PA0A1B0GUS4 154 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 K7EIM0 57 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 HOXA3O43365 443 aaPredicted RBP8.15□□□□□ -1.1
TPM3-217ENST00000504663 DFFBO76075 338 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 ACTL6BO94805 426 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 SCAF4O95104 1147 aaKnown RBP8.15□□□□□ -1.1
TPM3-217ENST00000504663 IGF1P05019 195 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 NMBP08949 121 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 HBG1P69891 147 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 HBG2P69892 147 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 RPP30P78346 268 aaKnown RBP8.15□□□□□ -1.1
TPM3-217ENST00000504663 CFHR3Q02985 330 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 ZNF266Q14584 549 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 SLC16A13Q7RTY0 426 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 CENPVQ7Z7K6 275 aaPredicted RBP8.15□□□□□ -1.1
TPM3-217ENST00000504663 HSD17B11Q8NBQ5 300 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 LFNGQ8NES3 379 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 FAM110DQ8TAY7 271 aaPredicted RBP8.15□□□□□ -1.1
TPM3-217ENST00000504663 RNASEH2CQ8TDP1 164 aaKnown RBP8.15□□□□□ -1.1
TPM3-217ENST00000504663 TMED6Q8WW62 240 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 PINX1Q96BK5 328 aaKnown RBP8.15□□□□□ -1.1
TPM3-217ENST00000504663 MGST2Q99735 147 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 UQCC1Q9NVA1 299 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 ZNF580Q9UK33 172 aa8.15□□□□□ -1.1
TPM3-217ENST00000504663 PAIP2BQ9ULR5 123 aaKnown RBP8.15□□□□□ -1.1
TPM3-217ENST00000504663 FN1P02751 2386 aaKnown RBP8.14□□□□□ -1.11
TPM3-217ENST00000504663 F8W735 103 aaPredicted RBP8.14□□□□□ -1.11
TPM3-217ENST00000504663 G3V318 75 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 CNIH1O95406 144 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 PRH1P02810 166 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 SEC11BP0C7V7 166 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 CD33P20138 364 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 PPIFP30405 207 aaKnown RBP8.14□□□□□ -1.11
TPM3-217ENST00000504663 RAB11AP62491 216 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 GAMTQ14353 236 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 TMEM86BQ8N661 226 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 TEX29Q8N6K0 151 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 ABHD5Q8WTS1 349 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 PCNPQ8WW12 178 aaKnown RBP8.14□□□□□ -1.11
TPM3-217ENST00000504663 TAF15Q92804 592 aaKnown RBP eCLIP8.14□□□□□ -1.11
TPM3-217ENST00000504663 RSG1Q9BU20 258 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 WNT10AQ9GZT5 417 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 GSX1Q9H4S2 264 aaPredicted RBP8.14□□□□□ -1.11
TPM3-217ENST00000504663 ZNF702PQ9H963 129 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 PARP11Q9NR21 331 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 UBQLN2Q9UHD9 624 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 PITPNC1Q9UKF7 332 aa8.14□□□□□ -1.11
TPM3-217ENST00000504663 BORCS7-ASMTA0A0B4J1R7 106 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 M0QZK8 103 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
TPM3-217ENST00000504663 IFNA4P05014 189 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 FOSL1P15407 271 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 GPX4P36969 197 aaPredicted RBP8.13□□□□□ -1.11
TPM3-217ENST00000504663 SNCAP37840 140 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 DEFA5Q01523 94 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 ACSM6Q6P461 480 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 TMEM182Q6ZP80 229 aaPredicted RBP8.13□□□□□ -1.11
TPM3-217ENST00000504663 THAP8Q8NA92 274 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms