RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SLC16A13Q7RTY0 426 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 RBMXL1Q96E39 390 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 MED9Q9NWA0 146 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 ZNF580Q9UK33 172 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 CRYBG3Q68DQ2 2970 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 APCP25054 2843 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 ZNF705EA8MWA4 302 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 PRH1P02810 166 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 NMBP08949 121 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 FAM157CP0CG43 387 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 RAB2AP61019 212 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 KLK9Q2XQG4 91 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 ARSJQ5FYB0 599 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 TREML4Q6UXN2 200 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 RBMS3Q6XE24 437 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 TMEM219Q86XT9 240 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 TMEM116Q8NCL8 245 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 FAM110DQ8TAY7 271 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 MISP3Q96FF7 219 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 NPCDR1Q9BY65 106 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 WNT10AQ9GZT5 417 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 PARP11Q9NR21 331 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 YAE1D1Q9NRH1 226 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 PFDN2Q9UHV9 154 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 VPREB3Q9UKI3 123 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 KLK9Q9UKQ9 250 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 LSM4Q9Y4Z0 139 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 CSPG4Q6UVK1 2322 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 UNC79Q9P2D8 2635 aa6.43□□□□□ -1.38
TOPBP1-202ENST00000503338 CCDC168Q8NDH2 2452 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 CELSR2Q9HCU4 2923 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 LINC00862A6NCI5 91 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 H3BUA1 57 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 AP4M1O00189 453 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 ATP6V0E1O15342 81 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 BRI3O95415 125 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 TSPAN15O95858 294 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 IGHG2P01859 326 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 HBE1P02100 147 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 IGF1P05019 195 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 REG1AP05451 166 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 FABP1P07148 127 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 EGR2P11161 476 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 RPL29P47914 159 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 CAMLGP49069 296 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 SELENOTP62341 195 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 NDPQ00604 133 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 GAMTQ14353 236 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 LY6EQ16553 131 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 ACOT6Q3I5F7 207 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 FBLN7Q53RD9 439 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 TMEM41BQ5BJD5 291 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 FAM74A1Q5RGS3 127 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 UNQ5815/PRO19632Q6UWF5 114 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 TMEM182Q6ZP80 229 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 SLC35E3Q7Z769 313 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 BCL6BQ8N143 479 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 COMMD1Q8N668 190 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 LFNGQ8NES3 379 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 HSPB9Q9BQS6 159 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 RSG1Q9BU20 258 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 C19orf24Q9BVV8 132 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 SH3BGRL3Q9H299 93 aa6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 GAR1Q9NY12 217 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 UTP20O75691 2785 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-202ENST00000503338 IGLV11-55A0A075B6I3 123 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 TRAV30A0A087WSZ9 112 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 AGPAT2O15120 278 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 MT-CO2P00403 227 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 AMY1AP04745 511 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 M6PRP20645 277 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 NPBWR1P48145 328 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 B2MP61769 119 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 RUNX1Q01196 453 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 KRTAP1-1Q07627 177 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 PXDC1Q5TGL8 231 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 ASPHD1Q5U4P2 390 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 IL34Q6ZMJ4 242 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 Q6ZRG5 221 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 THAP8Q8NA92 274 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 OR4X1Q8NH49 305 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 VN1R17PQ8TDU5 208 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 CXorf58Q96LI9 332 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 ZNF48Q96MX3 618 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 ATP6V0BQ99437 205 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 TRGV9Q99603 122 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 TXN2Q99757 166 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 FAM103A1Q9BTL3 118 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 GGTLC1Q9BX51 225 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 PRSS22Q9GZN4 317 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 NPFFR1Q9GZQ6 430 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 FNDC4Q9H6D8 234 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 CDC42EP3Q9UKI2 254 aa6.41□□□□□ -1.38
TOPBP1-202ENST00000503338 NAV3Q8IVL0 2385 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 PLXNB1O43157 2135 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 CENPEQ02224 2701 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 TRAV41A0A0B4J266 112 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 MDFIC2A0A1B0GVS7 189 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 TCRBV4S1A1TA0A5B7 111 aa6.4□□□□□ -1.38
TOPBP1-202ENST00000503338 ZFP92A6NM28 416 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms