RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 IGKV3-7A0A075B6H7 116 aa17.08■□□□□ 0.32
COL27A1-208ENST00000494780 RCVRNP35243 200 aa17.08■□□□□ 0.32
COL27A1-208ENST00000494780 PAFAH1B2P68402 229 aa17.08■□□□□ 0.32
COL27A1-208ENST00000494780 RARRES2Q99969 163 aa17.08■□□□□ 0.32
COL27A1-208ENST00000494780 GINS3Q9BRX5 216 aa17.08■□□□□ 0.32
COL27A1-208ENST00000494780 VCX3AQ9NNX9 186 aa17.08■□□□□ 0.32
COL27A1-208ENST00000494780 IGHV3-48P01763 117 aa17.07■□□□□ 0.32
COL27A1-208ENST00000494780 APOA1P02647 267 aa17.07■□□□□ 0.32
COL27A1-208ENST00000494780 GBGT1Q8N5D6 347 aa17.07■□□□□ 0.32
COL27A1-208ENST00000494780 PINX1Q96BK5 328 aaKnown RBP17.07■□□□□ 0.32
COL27A1-208ENST00000494780 COMMD3Q9UBI1 195 aa17.07■□□□□ 0.32
COL27A1-208ENST00000494780 IGHV3OR16-13A0A075B7E8 117 aa17.06■□□□□ 0.32
COL27A1-208ENST00000494780 IGHV3-74A0A0B4J1X5 117 aa17.06■□□□□ 0.32
COL27A1-208ENST00000494780 NPBWR1P48145 328 aa17.06■□□□□ 0.32
COL27A1-208ENST00000494780 TOMM20LQ6UXN7 152 aa17.06■□□□□ 0.32
COL27A1-208ENST00000494780 TCF24Q7RTU0 167 aa17.06■□□□□ 0.32
COL27A1-208ENST00000494780 SNX29P2Q8IUI4 249 aa17.06■□□□□ 0.32
COL27A1-208ENST00000494780 VSIRQ9H7M9 311 aa17.06■□□□□ 0.32
COL27A1-208ENST00000494780 A0A087WXM4 84 aa17.05■□□□□ 0.32
COL27A1-208ENST00000494780 LGALS9CQ6DKI2 356 aa17.05■□□□□ 0.32
COL27A1-208ENST00000494780 DUSP18Q8NEJ0 188 aa17.05■□□□□ 0.32
COL27A1-208ENST00000494780 C11orf68Q9H3H3 251 aaKnown RBP17.05■□□□□ 0.32
COL27A1-208ENST00000494780 RPP25LQ8N5L8 163 aaKnown RBP17.04■□□□□ 0.32
COL27A1-208ENST00000494780 OR11H2Q8NH07 326 aa17.04■□□□□ 0.32
COL27A1-208ENST00000494780 ST8SIA2Q92186 375 aa17.04■□□□□ 0.32
COL27A1-208ENST00000494780 ZNF486Q96H40 463 aaPredicted RBP17.04■□□□□ 0.32
COL27A1-208ENST00000494780 MFFQ9GZY8 342 aa17.04■□□□□ 0.32
COL27A1-208ENST00000494780 TRAV2A0A0B4J234 112 aa17.03■□□□□ 0.32
COL27A1-208ENST00000494780 INS-IGF2F8WCM5 200 aa17.03■□□□□ 0.32
COL27A1-208ENST00000494780 ST8SIA3O43173 380 aa17.03■□□□□ 0.32
COL27A1-208ENST00000494780 DFFBO76075 338 aa17.03■□□□□ 0.32
COL27A1-208ENST00000494780 SNCAP37840 140 aa17.03■□□□□ 0.32
COL27A1-208ENST00000494780 RND3P61587 244 aa17.03■□□□□ 0.32
COL27A1-208ENST00000494780 ZNF600Q6ZNG1 722 aa17.03■□□□□ 0.32
COL27A1-208ENST00000494780 C11orf45Q8TAV5 145 aa17.03■□□□□ 0.32
COL27A1-208ENST00000494780 DNASE2O00115 360 aaPredicted RBP17.02■□□□□ 0.32
COL27A1-208ENST00000494780 ELK1P19419 428 aa17.02■□□□□ 0.32
COL27A1-208ENST00000494780 IZUMO4Q1ZYL8 232 aa17.02■□□□□ 0.32
COL27A1-208ENST00000494780 SPINK9Q5DT21 86 aa17.02■□□□□ 0.32
COL27A1-208ENST00000494780 LILRB2Q8N423 598 aa17.02■□□□□ 0.32
COL27A1-208ENST00000494780 MS4A6AQ9H2W1 248 aa17.02■□□□□ 0.32
COL27A1-208ENST00000494780 ZFAND3Q9H8U3 227 aa17.02■□□□□ 0.32
COL27A1-208ENST00000494780 PUS1Q9Y606 427 aaKnown RBP eCLIP17.02■□□□□ 0.32
COL27A1-208ENST00000494780 M0QYG6 137 aa17.01■□□□□ 0.31
COL27A1-208ENST00000494780 CA1P00915 261 aaPredicted RBP17.01■□□□□ 0.31
COL27A1-208ENST00000494780 IGKV1-5P01602 117 aa17.01■□□□□ 0.31
COL27A1-208ENST00000494780 APOHP02749 345 aaPredicted RBP17.01■□□□□ 0.31
COL27A1-208ENST00000494780 NANOS2P60321 138 aaKnown RBP17.01■□□□□ 0.31
COL27A1-208ENST00000494780 NCS1P62166 190 aa17.01■□□□□ 0.31
COL27A1-208ENST00000494780 RBMS2Q15434 407 aaKnown RBP17.01■□□□□ 0.31
COL27A1-208ENST00000494780 PVRIGQ6DKI7 326 aa17.01■□□□□ 0.31
COL27A1-208ENST00000494780 SLC35G3Q8N808 338 aa17.01■□□□□ 0.31
COL27A1-208ENST00000494780 TMEM231Q9H6L2 316 aa17.01■□□□□ 0.31
COL27A1-208ENST00000494780 A0A0B4J293 547 aa17■□□□□ 0.31
COL27A1-208ENST00000494780 CORTO00230 105 aa17■□□□□ 0.31
COL27A1-208ENST00000494780 ATG12O94817 140 aa17■□□□□ 0.31
COL27A1-208ENST00000494780 TMEM50AO95807 157 aa17■□□□□ 0.31
COL27A1-208ENST00000494780 IFNA4P05014 189 aa17■□□□□ 0.31
COL27A1-208ENST00000494780 P0C879 139 aa17■□□□□ 0.31
COL27A1-208ENST00000494780 PGAM2P15259 253 aa17■□□□□ 0.31
COL27A1-208ENST00000494780 DEFB131AP59861 70 aa17■□□□□ 0.31
COL27A1-208ENST00000494780 TMEM187Q14656 261 aa17■□□□□ 0.31
COL27A1-208ENST00000494780 KMT2AQ03164 3969 aa17■□□□□ 0.31
COL27A1-208ENST00000494780 HPGDSO60760 199 aa16.99■□□□□ 0.31
COL27A1-208ENST00000494780 TNFAIP8O95379 198 aa16.99■□□□□ 0.31
COL27A1-208ENST00000494780 IFNA17P01571 189 aa16.99■□□□□ 0.31
COL27A1-208ENST00000494780 AKR1C2P52895 323 aa16.99■□□□□ 0.31
COL27A1-208ENST00000494780 SUB1P53999 127 aaKnown RBP eCLIP16.99■□□□□ 0.31
COL27A1-208ENST00000494780 PIGPP57054 158 aa16.99■□□□□ 0.31
COL27A1-208ENST00000494780 RPL11P62913 178 aaKnown RBP16.99■□□□□ 0.31
COL27A1-208ENST00000494780 LHFPL1Q86WI0 220 aa16.99■□□□□ 0.31
COL27A1-208ENST00000494780 TP53RKQ96S44 253 aa16.99■□□□□ 0.31
COL27A1-208ENST00000494780 PDCD10Q9BUL8 212 aa16.99■□□□□ 0.31
COL27A1-208ENST00000494780 FBXL17Q9UF56 701 aa16.99■□□□□ 0.31
COL27A1-208ENST00000494780 IGHV3-66A0A0C4DH42 116 aa16.98■□□□□ 0.31
COL27A1-208ENST00000494780 A0A1B0GU03 582 aa16.98■□□□□ 0.31
COL27A1-208ENST00000494780 DEDDO75618 318 aa16.98■□□□□ 0.31
COL27A1-208ENST00000494780 PI3P19957 117 aa16.98■□□□□ 0.31
COL27A1-208ENST00000494780 VBP1P61758 197 aa16.98■□□□□ 0.31
COL27A1-208ENST00000494780 RNASE10Q5GAN6 216 aaKnown RBP16.98■□□□□ 0.31
COL27A1-208ENST00000494780 ARRDC1Q8N5I2 433 aa16.98■□□□□ 0.31
COL27A1-208ENST00000494780 FUNDC2Q9BWH2 189 aa16.98■□□□□ 0.31
COL27A1-208ENST00000494780 C3orf85A0A1B0GTC6 90 aa16.97■□□□□ 0.31
COL27A1-208ENST00000494780 A0A1W2PS18 150 aa16.97■□□□□ 0.31
COL27A1-208ENST00000494780 RNASE2P10153 161 aaKnown RBP16.97■□□□□ 0.31
COL27A1-208ENST00000494780 NPPCP23582 126 aa16.97■□□□□ 0.31
COL27A1-208ENST00000494780 LEMD1Q68G75 181 aa16.97■□□□□ 0.31
COL27A1-208ENST00000494780 CLN5O75503 358 aa16.96■□□□□ 0.31
COL27A1-208ENST00000494780 TBPP20226 339 aa16.96■□□□□ 0.31
COL27A1-208ENST00000494780 HOXA1P49639 335 aaPredicted RBP16.96■□□□□ 0.31
COL27A1-208ENST00000494780 RORCP51449 518 aa16.96■□□□□ 0.31
COL27A1-208ENST00000494780 TCTAP57738 103 aa16.96■□□□□ 0.31
COL27A1-208ENST00000494780 STHQ8IWL8 128 aa16.96■□□□□ 0.31
COL27A1-208ENST00000494780 FAM24BQ8N5W8 94 aa16.96■□□□□ 0.31
COL27A1-208ENST00000494780 ENY2Q9NPA8 101 aa16.96■□□□□ 0.31
COL27A1-208ENST00000494780 KLK11Q9UBX7 282 aa16.96■□□□□ 0.31
COL27A1-208ENST00000494780 RABAC1Q9UI14 185 aa16.96■□□□□ 0.31
COL27A1-208ENST00000494780 FRAS1Q86XX4 4008 aa16.96■□□□□ 0.31
COL27A1-208ENST00000494780 FAM25AB3EWG3 89 aa16.95■□□□□ 0.3
COL27A1-208ENST00000494780 FAM25CB3EWG5 89 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms