RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SPANXN3Q5MJ09 141 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 FAM173BQ6P4H8 233 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 C12orf45Q8N5I9 185 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 MCFD2Q8NI22 146 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 H1FXQ92522 213 aaKnown RBP0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 TMEM106AQ96A25 262 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 GLTPQ9NZD2 209 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 FBXO5Q9UKT4 447 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 DIDO1Q9BTC0 2240 aaKnown RBP0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 GREB1Q4ZG55 1949 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 TONSLQ96HA7 1378 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 BRWD1Q9NSI6 2320 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 CPAMD8Q8IZJ3 1885 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 RP1L1Q8IWN7 2480 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 COL4A1P02462 1669 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 TRAV9-1A0A075B6T8 112 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 TRAPPC13A5PLN9 417 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 BUB1B-PAK6H3BSN5 160 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 SDCBPO00560 298 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 FADS1O60427 444 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 PMP2P02689 132 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 G6PCP35575 357 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 MAGEA12P43365 314 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 TMEM97Q5BJF2 176 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 LCN15Q6UWW0 184 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 FP248Q71RG6 208 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 BPIFA4PQ86YQ2 179 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 ZNF439Q8NDP4 499 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 TERB2Q8NHR7 220 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 PFN4Q8NHR9 129 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 MBD3L1Q8WWY6 194 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 SCGB3A1Q96QR1 104 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 NAA38Q9BRA0 125 aaKnown RBP0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 TMEM147Q9BVK8 224 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 MRPL32Q9BYC8 188 aaKnown RBP0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 TRIM4Q9C037 500 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 RNASE7Q9H1E1 156 aaKnown RBP0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 UQCC1Q9NVA1 299 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 C14orf105Q9NVL8 296 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 IDI2-AS1Q9NZ38 188 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 ROBO3Q96MS0 1386 aa0.92□□□□□ -2.26
HMGB1P30-201ENST00000492455 TRBV6-5A0A0K0K1A5 114 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 hADV38S2A0JD32 116 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 PIRO00625 290 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 ZNF682O95780 498 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 IFNA10P01566 189 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 CRPP02741 224 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 RPSAP08865 295 aaKnown RBP0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 HTR1AP08908 422 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 UBBP0CG47 229 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 ELOBQ15370 118 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 NNATQ16517 81 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 C12orf74Q32Q52 190 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 AKIRIN2Q53H80 203 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 MIR17HGQ75NE6 70 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 CLVS1Q8IUQ0 354 aaPredicted RBP0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 OR6V1Q8N148 313 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 DEFB119Q8N690 84 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 CT55Q8WUE5 264 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 CMSS1Q9BQ75 279 aaKnown RBP0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 YIPF3Q9GZM5 350 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 CYSTM1Q9H1C7 97 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 TLNRD1Q9H1K6 362 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 CKLFQ9UBR5 152 aa0.91□□□□□ -2.26
HMGB1P30-201ENST00000492455 KMT2BQ9UMN6 2715 aaPredicted RBP0.9□□□□□ -2.26
HMGB1P30-201ENST00000492455 SMARCA4P51532 1647 aa0.9□□□□□ -2.26
HMGB1P30-201ENST00000492455 PDE6DO43924 150 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR2J2O76002 312 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 SHBGP04278 402 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 IFNA6P05013 189 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 RBP1P09455 135 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 HOXA6P31267 233 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 REEP5Q00765 189 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 SPA17Q15506 151 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 Q6ZQT0 140 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 AAED1Q7RTV5 226 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 GDPD1Q8N9F7 314 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 WFDC11Q8NEX6 87 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR52R1Q8NGF1 315 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR52L1Q8NGH7 329 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 CCDC90BQ9GZT6 254 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 SLC39A9Q9NUM3 307 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 HECW2Q9P2P5 1572 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 MAST2Q6P0Q8 1798 aa0.9□□□□□ -2.27
HMGB1P30-201ENST00000492455 TTC21AQ8NDW8 1320 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 CCDC144AA2RUR9 1427 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 TENM1Q9UKZ4 2725 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 INTS1Q8N201 2190 aaKnown RBP0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 hCG_1818297A0A087WSY0 165 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 A0A0D9SG52 128 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 A8MT66 165 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 OR7C1O76099 320 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 SERPINE1P05121 402 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 CTSDP07339 412 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 CRYGAP11844 174 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 CDC42P60953 191 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 ZNF846Q147U1 533 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 DPPA3Q6W0C5 159 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 DEFB128Q7Z7B8 93 aa0.89□□□□□ -2.27
HMGB1P30-201ENST00000492455 OOSP2Q86WS3 158 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms