RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CTF1Q16619 201 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 ZFP69Q49AA0 526 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 Q6ZTC4 211 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 FAM24BQ8N5W8 94 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 TMEM116Q8NCL8 245 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 SECTM1Q8WVN6 248 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 OR10C1Q96KK4 312 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 ATP6V0BQ99437 205 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 SCRT1Q9BWW7 348 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 COMMD5Q9GZQ3 224 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 C6orf62Q9GZU0 229 aaPredicted RBP9.58□□□□□ -0.88
USF1-206ENST00000491629 HRH4Q9H3N8 390 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 ACOT13Q9NPJ3 140 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 NDUFA4L2Q9NRX3 87 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 F11RQ9Y624 299 aaKnown RBP9.58□□□□□ -0.88
USF1-206ENST00000491629 ELOA3CA0A087WX78 387 aaPredicted RBP9.57□□□□□ -0.88
USF1-206ENST00000491629 IGHV4-28A0A0C4DH34 117 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 C15orf61A6NNL5 157 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 HPRT1P00492 218 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 APOA1P02647 267 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 FGF2P09038 288 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 NQO2P16083 231 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 TMEM187Q14656 261 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 MSMO1Q15800 293 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 LEMD1Q68G75 181 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 LINC00469Q8N7U9 141 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 UBAC2Q8NBM4 344 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 DYNC2LI1Q8TCX1 351 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 FUNDC2Q9BWH2 189 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 LRP1BQ9NZR2 4599 aa9.57□□□□□ -0.88
USF1-206ENST00000491629 PDCD5O14737 125 aa9.56□□□□□ -0.88
USF1-206ENST00000491629 APOHP02749 345 aaPredicted RBP9.56□□□□□ -0.88
USF1-206ENST00000491629 RAB3BP20337 219 aa9.56□□□□□ -0.88
USF1-206ENST00000491629 FCGR2CP31995 323 aa9.56□□□□□ -0.88
USF1-206ENST00000491629 ETV6P41212 452 aa9.56□□□□□ -0.88
USF1-206ENST00000491629 CBX5P45973 191 aa9.56□□□□□ -0.88
USF1-206ENST00000491629 UBE2UQ5VVX9 321 aa9.56□□□□□ -0.88
USF1-206ENST00000491629 ZNF818PQ6ZRF7 136 aa9.56□□□□□ -0.88
USF1-206ENST00000491629 SCN3BQ9NY72 215 aa9.56□□□□□ -0.88
USF1-206ENST00000491629 X6R8D5 127 aa9.56□□□□□ -0.88
USF1-206ENST00000491629 DBX1A6NMT0 343 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 M0R2N4 97 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 NUPL2O15504 423 aaKnown RBP9.55□□□□□ -0.88
USF1-206ENST00000491629 RGS10O43665 173 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 PPYP01298 95 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 ARL6IP1Q15041 203 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 Q56UQ5 140 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 ZNF575Q86XF7 245 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 OR51H1Q8NH63 302 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 ST8SIA2Q92186 375 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 YIPF6Q96EC8 236 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 ST6GAL2Q96JF0 529 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 NXF2Q9GZY0 626 aaKnown RBP9.55□□□□□ -0.88
USF1-206ENST00000491629 PLEKHA2Q9HB19 425 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 CELA1Q9UNI1 258 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 NSG2Q9Y328 171 aa9.55□□□□□ -0.88
USF1-206ENST00000491629 TRAV10A0A0B4J240 114 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 LINC00862A6NCI5 91 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 I3L2K1 104 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 C4BPBP20851 252 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 NKX2-5P52952 324 aaPredicted RBP9.54□□□□□ -0.88
USF1-206ENST00000491629 CMC4P56277 68 aaPredicted RBP9.54□□□□□ -0.88
USF1-206ENST00000491629 DEFB131AP59861 70 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 PVRIGQ6DKI7 326 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 TCF24Q7RTU0 167 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 ZBTB34Q8NCN2 500 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 BEST4Q8NFU0 473 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 DMBX1Q8NFW5 382 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 OR1L8Q8NGR8 309 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 ZFAND1Q8TCF1 268 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 RNF126Q9BV68 326 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 SLC5A7Q9GZV3 580 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 MS4A6AQ9H2W1 248 aa9.54□□□□□ -0.88
USF1-206ENST00000491629 APOBP04114 4563 aaKnown RBP9.54□□□□□ -0.88
USF1-206ENST00000491629 TRAV14DV4A0A0A6YYC5 116 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 TRDV1A0A1B0GX56 115 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 ZNF705EA8MWA4 302 aaPredicted RBP9.53□□□□□ -0.88
USF1-206ENST00000491629 IGHV3-48P01763 117 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 FXYD4P59646 89 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 C12orf74Q32Q52 190 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 C22orf42Q6IC83 251 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 HSD17B13Q7Z5P4 300 aaPredicted RBP9.53□□□□□ -0.88
USF1-206ENST00000491629 NOXA1Q86UR1 476 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 POM121L12Q8N7R1 296 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 OR5H6Q8NGV6 325 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 LSM10Q969L4 123 aaKnown RBP9.53□□□□□ -0.88
USF1-206ENST00000491629 CCDC32Q9BV29 185 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 HINT2Q9BX68 163 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 SLIRPQ9GZT3 109 aaKnown RBP9.53□□□□□ -0.88
USF1-206ENST00000491629 VSIRQ9H7M9 311 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 SCPEP1Q9HB40 452 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 NDUFB11Q9NX14 153 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 COMMD9Q9P000 198 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 TPRKBQ9Y3C4 175 aa9.53□□□□□ -0.88
USF1-206ENST00000491629 MARCH11A6NNE9 402 aa9.52□□□□□ -0.89
USF1-206ENST00000491629 CYB5BO43169 146 aa9.52□□□□□ -0.89
USF1-206ENST00000491629 DFFBO76075 338 aa9.52□□□□□ -0.89
USF1-206ENST00000491629 YIF1AO95070 293 aa9.52□□□□□ -0.89
USF1-206ENST00000491629 AMBPP02760 352 aa9.52□□□□□ -0.89
USF1-206ENST00000491629 FCER2P06734 321 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms