RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 EIF2B2P49770 351 aaKnown RBP1.86□□□□□ -2.11
XRN1-213ENST00000489241 SERPINB9P50453 376 aa1.86□□□□□ -2.11
XRN1-213ENST00000489241 CDC42P60953 191 aa1.86□□□□□ -2.11
XRN1-213ENST00000489241 SLC38A11Q08AI6 406 aa1.86□□□□□ -2.11
XRN1-213ENST00000489241 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
XRN1-213ENST00000489241 FAM173BQ6P4H8 233 aa1.86□□□□□ -2.11
XRN1-213ENST00000489241 BPIFA4PQ86YQ2 179 aa1.86□□□□□ -2.11
XRN1-213ENST00000489241 OR11H6Q8NGC7 330 aa1.86□□□□□ -2.11
XRN1-213ENST00000489241 SLC25A40Q8TBP6 338 aa1.86□□□□□ -2.11
XRN1-213ENST00000489241 GNPDA2Q8TDQ7 276 aa1.86□□□□□ -2.11
XRN1-213ENST00000489241 DCANP1Q8TF63 244 aa1.86□□□□□ -2.11
XRN1-213ENST00000489241 PARVBQ9HBI1 364 aa1.86□□□□□ -2.11
XRN1-213ENST00000489241 SCAF11Q99590 1463 aaKnown RBP1.86□□□□□ -2.11
XRN1-213ENST00000489241 COL5A1P20908 1838 aaPredicted RBP1.86□□□□□ -2.11
XRN1-213ENST00000489241 OR51F1A6NGY5 319 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 TMEM238C9JI98 176 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 CIAO1O76071 339 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 S1PR2O95136 353 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 NAPSAO96009 420 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 NFYAP23511 347 aaPredicted RBP1.85□□□□□ -2.11
XRN1-213ENST00000489241 AQP4P55087 323 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 SLC36A1Q7Z2H8 476 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 CLVS1Q8IUQ0 354 aaPredicted RBP1.85□□□□□ -2.11
XRN1-213ENST00000489241 OR52R1Q8NGF1 315 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 PFN4Q8NHR9 129 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 RNASE11Q8TAA1 199 aaKnown RBP1.85□□□□□ -2.11
XRN1-213ENST00000489241 DOHHQ9BU89 302 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 TMEM106BQ9NUM4 274 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 KIF24Q5T7B8 1368 aa1.85□□□□□ -2.11
XRN1-213ENST00000489241 DENND4BO75064 1496 aaPredicted RBP1.84□□□□□ -2.11
XRN1-213ENST00000489241 OR5F1O95221 314 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 CLPSP04118 112 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 TRGC1P0CF51 173 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 ERP29P30040 261 aaKnown RBP1.84□□□□□ -2.11
XRN1-213ENST00000489241 FXYD2P54710 66 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 HSPE1P61604 102 aaKnown RBP1.84□□□□□ -2.11
XRN1-213ENST00000489241 RPL19P84098 196 aaKnown RBP1.84□□□□□ -2.11
XRN1-213ENST00000489241 RELAQ04206 551 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 KRR1Q13601 381 aaKnown RBP1.84□□□□□ -2.11
XRN1-213ENST00000489241 Q6Q795 121 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 GOLT1AQ6ZVE7 132 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 MIR17HGQ75NE6 70 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 LYG2Q86SG7 212 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 DNAJC9Q8WXX5 260 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 C11orf40Q8WZ69 217 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 SCGB3A1Q96QR1 104 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 HSPB9Q9BQS6 159 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 SLC39A9Q9NUM3 307 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 TVP23BQ9NYZ1 205 aa1.84□□□□□ -2.11
XRN1-213ENST00000489241 ICE1Q9Y2F5 2266 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 TRAPPC13A5PLN9 417 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 MEIS3P1A6NDR6 274 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 C1QCP02747 245 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 IGKV1-16P04430 117 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 G0S2P27469 103 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 GNG10P50151 68 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 TMEM86AQ8N2M4 240 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 GPR146Q96CH1 333 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 C2orf50Q96LR7 162 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 PRRT1Q99946 306 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 ERGIC3Q9Y282 383 aa1.83□□□□□ -2.12
XRN1-213ENST00000489241 TOPBP1Q92547 1522 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 VWDEQ8N2E2 1590 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 TRAV4A0A0B4J268 109 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 CLDN25C9JDP6 229 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 E5RI56 91 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 C1QBP02746 253 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 CASP1P29466 404 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 SRIP30626 198 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 DEFB103AP81534 67 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 TMEM155Q4W5P6 130 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 LINC01554Q52M75 96 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 LCA10Q71F78 164 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 TMED4Q7Z7H5 227 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 TMEM106AQ96A25 262 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 BAIAP2Q9UQB8 552 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 MAST2Q6P0Q8 1798 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 DOCK5Q9H7D0 1870 aa1.82□□□□□ -2.12
XRN1-213ENST00000489241 MALRD1Q5VYJ5 2156 aa1.81□□□□□ -2.12
XRN1-213ENST00000489241 ZNF860A6NHJ4 632 aa1.81□□□□□ -2.12
XRN1-213ENST00000489241 HMGB3O15347 200 aaKnown RBP1.81□□□□□ -2.12
XRN1-213ENST00000489241 ZNF737O75373 536 aa1.81□□□□□ -2.12
XRN1-213ENST00000489241 SHBGP04278 402 aa1.81□□□□□ -2.12
XRN1-213ENST00000489241 ATP5G3P48201 142 aa1.81□□□□□ -2.12
XRN1-213ENST00000489241 NDUFA5Q16718 116 aa1.81□□□□□ -2.12
XRN1-213ENST00000489241 HIST3H2BBQ8N257 126 aa1.81□□□□□ -2.12
XRN1-213ENST00000489241 SIGLECL1Q8N7X8 197 aa1.81□□□□□ -2.12
XRN1-213ENST00000489241 C9orf163Q8N9P6 203 aa1.81□□□□□ -2.12
XRN1-213ENST00000489241 HOPXQ9BPY8 73 aaPredicted RBP1.81□□□□□ -2.12
XRN1-213ENST00000489241 GINS4Q9BRT9 223 aa1.81□□□□□ -2.12
XRN1-213ENST00000489241 RNF122Q9H9V4 155 aa1.81□□□□□ -2.12
XRN1-213ENST00000489241 TRBV19A0A075B6N1 114 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 IBA57-AS1B1ANH7 110 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 ORC5O43913 435 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 ATG12O94817 140 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 S100A4P26447 101 aaKnown RBP1.8□□□□□ -2.12
XRN1-213ENST00000489241 PIGPP57054 158 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 VBP1P61758 197 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 POU6F1Q14863 301 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms