RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SIGLECL1Q8N7X8 197 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 LFNGQ8NES3 379 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 SGMS2Q8NHU3 365 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 LRRC20Q8TCA0 184 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 RNF141Q8WVD5 230 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 CACNG8Q8WXS5 425 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 ACY3Q96HD9 319 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 PSMG3Q9BT73 122 aaPredicted RBP7.92□□□□□ -1.14
USP11-211ENST00000489111 RSG1Q9BU20 258 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 TMUB1Q9BVT8 246 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 WNT10AQ9GZT5 417 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 NPVFQ9HCQ7 196 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 WDR83OSQ9Y284 106 aa7.92□□□□□ -1.14
USP11-211ENST00000489111 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.92□□□□□ -1.144e-8■□□□□ 9.1
USP11-211ENST00000489111 PRRC2AP48634 2157 aaKnown RBP7.91□□□□□ -1.14
USP11-211ENST00000489111 ZNF705EA8MWA4 302 aaPredicted RBP7.91□□□□□ -1.14
USP11-211ENST00000489111 UMAD1C9J7I0 102 aa7.91□□□□□ -1.14
USP11-211ENST00000489111 HOXA3O43365 443 aaPredicted RBP7.91□□□□□ -1.14
USP11-211ENST00000489111 RAB5CP51148 216 aa7.91□□□□□ -1.14
USP11-211ENST00000489111 CLLU1Q5K131 121 aa7.91□□□□□ -1.14
USP11-211ENST00000489111 TEPPQ6URK8 271 aa7.91□□□□□ -1.14
USP11-211ENST00000489111 TREML4Q6UXN2 200 aa7.91□□□□□ -1.14
USP11-211ENST00000489111 TTC9CQ8N5M4 171 aa7.91□□□□□ -1.14
USP11-211ENST00000489111 FAM110DQ8TAY7 271 aaPredicted RBP7.91□□□□□ -1.14
USP11-211ENST00000489111 PCNPQ8WW12 178 aaKnown RBP7.91□□□□□ -1.14
USP11-211ENST00000489111 TMEM68Q96MH6 324 aa7.91□□□□□ -1.14
USP11-211ENST00000489111 ZNF48Q96MX3 618 aaPredicted RBP7.91□□□□□ -1.14
USP11-211ENST00000489111 NPCDR1Q9BY65 106 aa7.91□□□□□ -1.14
USP11-211ENST00000489111 FBXO7Q9Y3I1 522 aa7.91□□□□□ -1.14
USP11-211ENST00000489111 TIMM9Q9Y5J7 89 aa7.91□□□□□ -1.14
USP11-211ENST00000489111 NOTCH2Q04721 2471 aa7.91□□□□□ -1.14
USP11-211ENST00000489111 WNK2Q9Y3S1 2297 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 TRAV41A0A0B4J266 112 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 TRIM77I1YAP6 450 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 MT-CO2P00403 227 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 AMY1AP04745 511 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 CRYGCP07315 174 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 NMBP08949 121 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 EGR2P11161 476 aaPredicted RBP7.9□□□□□ -1.14
USP11-211ENST00000489111 HIST1H1BP16401 226 aaKnown RBP7.9□□□□□ -1.14
USP11-211ENST00000489111 CAMLGP49069 296 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 SULT1A2P50226 295 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 RND2P52198 227 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 MFAP2P55001 183 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 ELLP55199 621 aaPredicted RBP7.9□□□□□ -1.14
USP11-211ENST00000489111 GAMTQ14353 236 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 NDUFA5Q16718 116 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 ASPHD1Q5U4P2 390 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 PVRIGQ6DKI7 326 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 TMEM144Q7Z5S9 345 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 OR5T1Q8NG75 326 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 FAM213BQ8TBF2 198 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 NPFFR1Q9GZQ6 430 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 PRDM13Q9H4Q3 707 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 TMEM160Q9NX00 188 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 THYN1Q9P016 225 aa7.9□□□□□ -1.14
USP11-211ENST00000489111 CR1P17927 2039 aa7.9□□□□□ -1.15
USP11-211ENST00000489111 FLNAP21333 2647 aaKnown RBP7.89□□□□□ -1.15
USP11-211ENST00000489111 AP4M1O00189 453 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 SOX15O60248 233 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 IGHG2P01859 326 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 MBP02144 154 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 CD99P14209 185 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 MDKP21741 143 aaPredicted RBP7.89□□□□□ -1.15
USP11-211ENST00000489111 CRIP2P52943 208 aaPredicted RBP7.89□□□□□ -1.15
USP11-211ENST00000489111 BLOC1S1P78537 153 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 SERF2P84101 59 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 ZNF616Q08AN1 781 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 AKIRIN2Q53H80 203 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 FFAR4Q5NUL3 377 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 ACSM6Q6P461 480 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 TMEM86BQ8N661 226 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 OR2T6Q8NHC8 308 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 NPIPB3Q92617 1050 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 SAT2Q96F10 170 aaPredicted RBP7.89□□□□□ -1.15
USP11-211ENST00000489111 MGST2Q99735 147 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 GGTLC1Q9BX51 225 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 FNDC4Q9H6D8 234 aaPredicted RBP7.89□□□□□ -1.15
USP11-211ENST00000489111 ZNF355PQ9NSJ1 428 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 CDC42EP3Q9UKI2 254 aa7.89□□□□□ -1.15
USP11-211ENST00000489111 LSM4Q9Y4Z0 139 aaKnown RBP7.89□□□□□ -1.15
USP11-211ENST00000489111 IGLV11-55A0A075B6I3 123 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 IGHV3-21A0A0B4J1V1 117 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 ZFP92A6NM28 416 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 G3V318 75 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 AGPAT2O15120 278 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 SCGB2A1O75556 95 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 TSPAN15O95858 294 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 LY6G6DO95868 133 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 IGHV3-48P01763 117 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 IGF1P05019 195 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 FOSL1P15407 271 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 SRD5A1P18405 259 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 BLCAPP62952 87 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 MLANAQ16655 118 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 TMEM41BQ5BJD5 291 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 DPPA3Q6W0C5 159 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 Q6ZRG5 221 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 SMR3AQ99954 134 aa7.88□□□□□ -1.15
USP11-211ENST00000489111 PRSS22Q9GZN4 317 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms