RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 FAM90A2PQ658T7 463 aa11.66□□□□□ -0.54
ERGIC3-217ENST00000488935 TOMM20LQ6UXN7 152 aa11.66□□□□□ -0.54
ERGIC3-217ENST00000488935 TCF24Q7RTU0 167 aa11.66□□□□□ -0.54
ERGIC3-217ENST00000488935 GPX8Q8TED1 209 aa11.66□□□□□ -0.54
ERGIC3-217ENST00000488935 BORCS5Q969J3 196 aa11.66□□□□□ -0.54
ERGIC3-217ENST00000488935 RARRES2Q99969 163 aa11.66□□□□□ -0.54
ERGIC3-217ENST00000488935 NXF2Q9GZY0 626 aaKnown RBP11.66□□□□□ -0.54
ERGIC3-217ENST00000488935 FKBP11Q9NYL4 201 aa11.66□□□□□ -0.54
ERGIC3-217ENST00000488935 KLK5Q9Y337 293 aaPredicted RBP11.66□□□□□ -0.54
ERGIC3-217ENST00000488935 MPTX1A8MV57 137 aa11.65□□□□□ -0.54
ERGIC3-217ENST00000488935 GNG7O60262 68 aa11.65□□□□□ -0.54
ERGIC3-217ENST00000488935 DFFBO76075 338 aa11.65□□□□□ -0.54
ERGIC3-217ENST00000488935 RELQ04864 619 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-217ENST00000488935 OR11H2Q8NH07 326 aa11.65□□□□□ -0.54
ERGIC3-217ENST00000488935 MRPL36Q9P0J6 103 aaKnown RBP11.65□□□□□ -0.54
ERGIC3-217ENST00000488935 A0A087WXM4 84 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 HPGDSO60760 199 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 ELK1P19419 428 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 DEFB131AP59861 70 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 HSPE1P61604 102 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 VBP1P61758 197 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 RPL11P62913 178 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 PRR20EP86478 221 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 PRR20CP86479 221 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 PRR20DP86480 221 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 PRR20BP86481 221 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 PRR20AP86496 221 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 PRCDQ00LT1 54 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 OR10C1Q96KK4 312 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 TSC22D3Q99576 134 aa11.64□□□□□ -0.55
ERGIC3-217ENST00000488935 A0A1B0GU03 582 aa11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 ST8SIA3O43173 380 aa11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 CA1P00915 261 aaPredicted RBP11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 IGKV1-5P01602 117 aa11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 PGAM2P15259 253 aa11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 PPP5CP53041 499 aa11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 SP6Q3SY56 376 aa11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 CROCCP3Q8IVE0 287 aa11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 ATP6V0BQ99437 205 aa11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 MS4A6AQ9H2W1 248 aa11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 PUS1Q9Y606 427 aaKnown RBP eCLIP11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 DNAH6Q9C0G6 4158 aa11.63□□□□□ -0.55
ERGIC3-217ENST00000488935 A0A0B4J293 547 aa11.62□□□□□ -0.55
ERGIC3-217ENST00000488935 DNASE2O00115 360 aaPredicted RBP11.62□□□□□ -0.55
ERGIC3-217ENST00000488935 ETV6P41212 452 aa11.62□□□□□ -0.55
ERGIC3-217ENST00000488935 CADM3Q8N126 398 aa11.62□□□□□ -0.55
ERGIC3-217ENST00000488935 C11orf45Q8TAV5 145 aa11.62□□□□□ -0.55
ERGIC3-217ENST00000488935 CMTM3Q96MX0 182 aa11.62□□□□□ -0.55
ERGIC3-217ENST00000488935 TP53RKQ96S44 253 aa11.62□□□□□ -0.55
ERGIC3-217ENST00000488935 C6orf62Q9GZU0 229 aaPredicted RBP11.62□□□□□ -0.55
ERGIC3-217ENST00000488935 VCX3AQ9NNX9 186 aa11.62□□□□□ -0.55
ERGIC3-217ENST00000488935 A0A0G2JRQ6 117 aa11.61□□□□□ -0.55
ERGIC3-217ENST00000488935 ERHP84090 104 aaKnown RBP11.61□□□□□ -0.55
ERGIC3-217ENST00000488935 TMEM217Q8N7C4 229 aa11.61□□□□□ -0.55
ERGIC3-217ENST00000488935 TXN2Q99757 166 aa11.61□□□□□ -0.55
ERGIC3-217ENST00000488935 ZFAND3Q9H8U3 227 aa11.61□□□□□ -0.55
ERGIC3-217ENST00000488935 KLK11Q9UBX7 282 aa11.61□□□□□ -0.55
ERGIC3-217ENST00000488935 RABAC1Q9UI14 185 aa11.61□□□□□ -0.55
ERGIC3-217ENST00000488935 SMIM31A0A1B0GVY4 71 aa11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 KNCNA6PVL3 124 aa11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 TMEM50AO95807 157 aa11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 IFNA17P01571 189 aa11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 S100GP29377 79 aa11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 RCVRNP35243 200 aa11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 RBMS2Q15434 407 aaKnown RBP11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 LPCAT3Q6P1A2 487 aa11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 ZNF114Q8NC26 417 aa11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 FUNDC2Q9BWH2 189 aa11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 NAA50Q9GZZ1 169 aaKnown RBP11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 FNDC4Q9H6D8 234 aaPredicted RBP11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 VSIRQ9H7M9 311 aa11.6□□□□□ -0.55
ERGIC3-217ENST00000488935 HECTD4Q9Y4D8 3996 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 FAM25AB3EWG3 89 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 FAM25CB3EWG5 89 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 FAM25GB3EWG6 89 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 TMEM127O75204 238 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 CD3DP04234 171 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 SMIM18P0DKX4 95 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 RNASE2P10153 161 aaKnown RBP11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 UCP3P55916 312 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 PIGPP57054 158 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 PAFAH1B2P68402 229 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 SLC35G3Q8N808 338 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 DUSP18Q8NEJ0 188 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 STXBP6Q8NFX7 210 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 OR4D10Q8NGI6 311 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 OR52I2Q8NH67 350 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 GATAD1Q8WUU5 269 aa11.59□□□□□ -0.55
ERGIC3-217ENST00000488935 HERC2O95714 4834 aa11.58□□□□□ -0.55
ERGIC3-217ENST00000488935 APOA1P02647 267 aa11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 GIG44P09565 113 aaPredicted RBP11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 ATF4P18848 351 aaPredicted RBP11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 SNCAP37840 140 aa11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 NPBWR1P48145 328 aa11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 AKR1C2P52895 323 aa11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 TMEM187Q14656 261 aa11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 TIGITQ495A1 244 aa11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 LGALS9CQ6DKI2 356 aa11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 ZNF600Q6ZNG1 722 aa11.58□□□□□ -0.56
ERGIC3-217ENST00000488935 Q6ZRM9 215 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms