RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 TSPAN5P62079 268 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 WT1-ASQ06250 92 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 CTF1Q16619 201 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 HAGHQ16775 308 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 TATDN3Q17R31 274 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 DEFB114Q30KQ6 69 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 ODF3L2Q3SX64 289 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 PXDC1Q5TGL8 231 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 SLC25A24Q6NUK1 477 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 FAAP20Q6NZ36 180 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 TMEM88Q6PEY1 159 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 DHRS11Q6UWP2 260 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 BTNL8Q6UX41 500 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 TBC1D26Q86UD7 250 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 SLC25A42Q86VD7 318 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 CROCCP3Q8IVE0 287 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 UBAC2Q8NBM4 344 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 OR4D10Q8NGI6 311 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 EEF1AKMT3Q96AZ1 226 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 DGCR14Q96DF8 476 aaKnown RBP4.43□□□□□ -1.7
CDHR3-213ENST00000488386 NEURL2Q9BR09 285 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 COMMD5Q9GZQ3 224 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 TUBA4BQ9H853 241 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 PEMTQ9UBM1 199 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 EXTL2Q9UBQ6 330 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 KLK11Q9UBX7 282 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 MLXQ9UH92 298 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 OR51B2Q9Y5P1 312 aa4.43□□□□□ -1.7
CDHR3-213ENST00000488386 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
CDHR3-213ENST00000488386 DNAH7Q8WXX0 4024 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 IGHV3-49A0A0A0MS15 119 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 TMEM213A2RRL7 107 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 RBMY1BA6NDE4 496 aaKnown RBP4.42□□□□□ -1.7
CDHR3-213ENST00000488386 RBMY1EA6NEQ0 496 aaKnown RBP4.42□□□□□ -1.7
CDHR3-213ENST00000488386 H0Y980 276 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 RBFOX2O43251 390 aaKnown RBP eCLIP4.42□□□□□ -1.75e-8■■■■□ 23
CDHR3-213ENST00000488386 GABARAPO95166 117 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 APOA1P02647 267 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 RBMY1DP0C7P1 496 aaKnown RBP4.42□□□□□ -1.7
CDHR3-213ENST00000488386 TRAPPC2P0DI81 140 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 TRAPPC2BP0DI82 140 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 CBLN1P23435 193 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 F2RP25116 425 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 RORCP51449 518 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 TAS2R46P59540 309 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 ERVK-16P61578 105 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 SPCS2Q15005 226 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 MSMO1Q15800 293 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 POU2AF1Q16633 256 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 CASC10Q5T4H9 136 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 LCN12Q6JVE5 192 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 GTSCR1Q86UQ5 136 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 LAX1Q8IWV1 398 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 TMEM61Q8N0U2 210 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 Q8N402 240 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 UXS1Q8NBZ7 420 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 OR6F1Q8NGZ6 308 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 OR52I2Q8NH67 350 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 OR4A5Q8NH83 315 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 MUC7Q8TAX7 377 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 ZNF502Q8TBZ5 544 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 MRGPRFQ96AM1 343 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 TM2D3Q9BRN9 247 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 CHRDL1Q9BU40 450 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 MIXL1Q9H2W2 232 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 SRD5A3Q9H8P0 318 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 PLEKHA2Q9HB19 425 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 UBQLN2Q9UHD9 624 aa4.42□□□□□ -1.7
CDHR3-213ENST00000488386 PLECQ15149 4684 aaKnown RBP4.42□□□□□ -1.7
CDHR3-213ENST00000488386 IGHV3OR16-13A0A075B7E8 117 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 IGHV3-74A0A0B4J1X5 117 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 A0A0G2JRQ6 117 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 SMIM31A0A1B0GVY4 71 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 OR11H12B2RN74 326 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 RHODO00212 210 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 CTDSP2O14595 271 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 TGOLN2O43493 480 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 CD3DP04234 171 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 SERPINE2P07093 398 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 PGAM2P15259 253 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 RCVRNP35243 200 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 SP6Q3SY56 376 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 SCGB2B2Q4G0G5 96 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 Q56UQ5 140 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 PLET1Q6UQ28 207 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 GPHB5Q86YW7 130 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 CLVS1Q8IUQ0 354 aaPredicted RBP4.41□□□□□ -1.7
CDHR3-213ENST00000488386 CMTM1Q8IZ96 169 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 GDPD1Q8N9F7 314 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 OR1L8Q8NGR8 309 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 PINX1Q96BK5 328 aaKnown RBP4.41□□□□□ -1.7
CDHR3-213ENST00000488386 ZNF414Q96IQ9 312 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 SEC22AQ96IW7 307 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 ABHD1Q96SE0 405 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 EDA2RQ9HAV5 297 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 NDUFA4L2Q9NRX3 87 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 SIGLEC8Q9NYZ4 499 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 COMMD9Q9P000 198 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 CEPT1Q9Y6K0 416 aa4.41□□□□□ -1.7
CDHR3-213ENST00000488386 TENM3Q9P273 2699 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms