RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 TM4SF5O14894 197 aa9.07□□□□□ -0.96
RPGR-208ENST00000482855 SP1P08047 785 aa9.07□□□□□ -0.96
RPGR-208ENST00000482855 HIST1H1AQ02539 215 aaPredicted RBP9.07□□□□□ -0.96
RPGR-208ENST00000482855 LTC4SQ16873 150 aa9.07□□□□□ -0.96
RPGR-208ENST00000482855 FAM120AOSQ5T036 256 aa9.07□□□□□ -0.96
RPGR-208ENST00000482855 MBD6Q96DN6 1003 aa9.07□□□□□ -0.96
RPGR-208ENST00000482855 ENY2Q9NPA8 101 aa9.07□□□□□ -0.96
RPGR-208ENST00000482855 LEPROTL1O95214 131 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 HLA-DRB1P01911 266 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 FAM231DQ6ZW35 169 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 TPRX1Q8N7U7 411 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 OR13A1Q8NGR1 328 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 SLC25A40Q8TBP6 338 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 URB1-AS1Q96HZ7 61 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 SCRT2Q9NQ03 307 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 CFAP54Q96N23 3096 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 SAP30O75446 220 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 IGLC1P0CG04 106 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 LYSMD4Q5XG99 296 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 VWA1Q6PCB0 445 aa9.06□□□□□ -0.96
RPGR-208ENST00000482855 SNRNP40Q96DI7 357 aaKnown RBP9.06□□□□□ -0.96
RPGR-208ENST00000482855 A0A087X0K7 114 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 GAGE10A6NGK3 116 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 WNT9BO14905 357 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 SPINT2O43291 252 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 KLF7O75840 302 aaPredicted RBP9.05□□□□□ -0.96
RPGR-208ENST00000482855 ZNF766Q5HY98 468 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 PET117Q6UWS5 81 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 ZNF841Q6ZN19 808 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 SARAFQ96BY9 339 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 PLPPR2Q96GM1 343 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 CHRDL1Q9BU40 450 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 MUC6Q6W4X9 2439 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 IGHV1-24A0A0C4DH33 117 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 HIGD1CA8MV81 97 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 NBEAP1P0C6P0 100 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 Q6ZR03 302 aa9.05□□□□□ -0.96
RPGR-208ENST00000482855 C7orf71A4D174 169 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 C15orf61A6NNL5 157 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 PROP1O75360 226 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 TFF1P04155 84 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 ADH4P08319 380 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 TRAT1Q6PIZ9 186 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 LINC00173Q6ZV60 143 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 ATP5L2Q7Z4Y8 100 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 FER1L6-AS1Q8NA97 138 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 CHCHD1Q96BP2 118 aaKnown RBP9.04□□□□□ -0.96
RPGR-208ENST00000482855 LINC00479Q96M42 142 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 S1PR3Q99500 378 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 ZNF430Q9H8G1 570 aaPredicted RBP9.04□□□□□ -0.96
RPGR-208ENST00000482855 FAM186AA6NE01 2351 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 PINLYPA6NC86 204 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 FNDC10F2Z333 226 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 GPR183P32249 361 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 ARF6P62330 175 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 GABRA6Q16445 453 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 GTF2H5Q6ZYL4 71 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 PIP4P1Q86T03 277 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 CXorf67Q86X51 503 aaPredicted RBP9.04□□□□□ -0.96
RPGR-208ENST00000482855 MS4A6AQ9H2W1 248 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 FSCN3Q9NQT6 498 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 GNG12Q9UBI6 72 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 DOCK10Q96BY6 2186 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 C8orf88P0DMB2 117 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 HIST1H1EP10412 219 aaKnown RBP9.04□□□□□ -0.96
RPGR-208ENST00000482855 FOXA3P55318 350 aaPredicted RBP9.04□□□□□ -0.96
RPGR-208ENST00000482855 ZNF826PQ6ZT77 177 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 MDP1Q86V88 176 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 C19orf24Q9BVV8 132 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 HINT2Q9BX68 163 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 MAP1LC3CQ9BXW4 147 aa9.04□□□□□ -0.96
RPGR-208ENST00000482855 HSPE1P61604 102 aaKnown RBP9.03□□□□□ -0.96
RPGR-208ENST00000482855 UBE2L3P68036 154 aaKnown RBP9.03□□□□□ -0.96
RPGR-208ENST00000482855 PAX2Q02962 417 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 TBC1D28Q2M2D7 210 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 SMIM21Q3B7S5 101 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 ALKBH6Q3KRA9 238 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 RPL39P5Q59GN2 51 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 OR1B1Q8NGR6 318 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 NANOS1Q8WY41 292 aaKnown RBP9.03□□□□□ -0.96
RPGR-208ENST00000482855 AP1S3Q96PC3 154 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 AMMECR1Q9Y4X0 333 aaPredicted RBP9.03□□□□□ -0.96
RPGR-208ENST00000482855 ZDBF2Q9HCK1 2354 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 A0A1B0GXF2 115 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 TNFSF15O95150 251 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 CER1O95813 267 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 FOLR3P41439 243 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 HOXA4Q00056 320 aaPredicted RBP9.03□□□□□ -0.96
RPGR-208ENST00000482855 PRR31Q5SQ13 230 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 SSX8Q7RTT4 187 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 DCTN5Q9BTE1 182 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 IDI2-AS1Q9NZ38 188 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 ZNF835Q9Y2P0 537 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 DNAJC13O75165 2243 aa9.03□□□□□ -0.96
RPGR-208ENST00000482855 APOA2P02652 100 aa9.02□□□□□ -0.97
RPGR-208ENST00000482855 LIPFP07098 398 aa9.02□□□□□ -0.97
RPGR-208ENST00000482855 KIR2DS2P43631 304 aa9.02□□□□□ -0.97
RPGR-208ENST00000482855 HBBP68871 147 aa9.02□□□□□ -0.97
RPGR-208ENST00000482855 IL11RAQ14626 422 aa9.02□□□□□ -0.97
RPGR-208ENST00000482855 ZC2HC1AQ96GY0 325 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms