RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 BRI3O95415 125 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 FSHBP01225 129 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 FABP1P07148 127 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 SEC11BP0C7V7 166 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 OR13C7P0DN81 318 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 NPY1RP25929 384 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 S100A7P31151 101 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 RPL15P61313 204 aaKnown RBP5.58□□□□□ -1.52
SHQ1-207ENST00000475558 DLK1P80370 383 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 SERF2P84101 59 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 HNF4GQ14541 408 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 TNXAQ16473 311 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 AKIRIN2Q53H80 203 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 KIAA2026Q5HYC2 2103 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 LDLRAD2Q5SZI1 272 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 TEX261Q6UWH6 196 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 Q6YL49 198 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 S100A7AQ86SG5 101 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 TTC9CQ8N5M4 171 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 ZNF709Q8N972 641 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 OR5C1Q8NGR4 320 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 RNF141Q8WVD5 230 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 WFDC12Q8WWY7 111 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 C22orf15Q8WYQ4 148 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 CITED4Q96RK1 184 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 ATP6V0BQ99437 205 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 ATP5SQ99766 215 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 TMEM147Q9BVK8 224 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 HINT2Q9BX68 163 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 SLC25A32Q9H2D1 315 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 FBXL15Q9H469 300 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 ESM1Q9NQ30 184 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 KCNIP2Q9NS61 270 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 UBQLN2Q9UHD9 624 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 ZNF580Q9UK33 172 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 PAIP2BQ9ULR5 123 aaKnown RBP5.58□□□□□ -1.52
SHQ1-207ENST00000475558 MOB4Q9Y3A3 225 aa5.58□□□□□ -1.52
SHQ1-207ENST00000475558 TRAV30A0A087WSZ9 112 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 TRAV3A0A0B4J244 114 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 A0A0U1RQK1 487 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 A6NDX4 124 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 MSGN1A6NI15 193 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 TEX46H3BTG2 121 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 RGS13O14921 159 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 TMEM50AO95807 157 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 CFDP00746 253 aaPredicted RBP5.57□□□□□ -1.52
SHQ1-207ENST00000475558 CRYGCP07315 174 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 IGHV4-38-2P0DP08 117 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 IAPPP10997 89 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 DEFA4P12838 97 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 IER3P46695 156 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 NKX2-5P52952 324 aaPredicted RBP5.57□□□□□ -1.52
SHQ1-207ENST00000475558 DLX1P56177 255 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 RAB2AP61019 212 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 CX3CL1P78423 397 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 BLOC1S1P78537 153 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 NHLH2Q02577 135 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 IZUMO4Q1ZYL8 232 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 BSXQ3C1V8 233 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 KLF17Q5JT82 389 aaPredicted RBP5.57□□□□□ -1.52
SHQ1-207ENST00000475558 PVRIGQ6DKI7 326 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 DPPA3Q6W0C5 159 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 DYNAPQ8N1N2 210 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 LILRB2Q8N423 598 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 Q8N9W7 124 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 ZNF680Q8NEM1 530 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 SCARB1Q8WTV0 552 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 SRSF12Q8WXF0 261 aaKnown RBP5.57□□□□□ -1.52
SHQ1-207ENST00000475558 RITA1Q96K30 269 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 GINS3Q9BRX5 216 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 SLC25A33Q9BSK2 321 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 ARV1Q9H2C2 271 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 UQCC1Q9NVA1 299 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 RNF24Q9Y225 148 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 TIMM9Q9Y5J7 89 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 CMYA5Q8N3K9 4069 aa5.57□□□□□ -1.52
SHQ1-207ENST00000475558 PRKDCP78527 4128 aaKnown RBP5.57□□□□□ -1.52
SHQ1-207ENST00000475558 NUDT19A8MXV4 375 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 H3BUA1 57 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 CLDN34H7C241 214 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 CST7O76096 145 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 CA2P00918 260 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 METTL15P1P0C7V9 234 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 SLC38A11Q08AI6 406 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 VWC2Q2TAL6 325 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 KLK9Q2XQG4 91 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 PXDC1Q5TGL8 231 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 BRD3OSQ6XYD6 125 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 TMEM144Q7Z5S9 345 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 CENPVQ7Z7K6 275 aaPredicted RBP5.56□□□□□ -1.52
SHQ1-207ENST00000475558 TMEM217Q8N7C4 229 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 PIFOQ8TCI5 191 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 ST8SIA2Q92186 375 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 ARPC1AQ92747 370 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 SAT2Q96F10 170 aaPredicted RBP5.56□□□□□ -1.52
SHQ1-207ENST00000475558 SLC35E1Q96K37 410 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 TXN2Q99757 166 aa5.56□□□□□ -1.52
SHQ1-207ENST00000475558 PSMG3Q9BT73 122 aaPredicted RBP5.56□□□□□ -1.52
SHQ1-207ENST00000475558 PRSS22Q9GZN4 317 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms