RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 IGHV4-61A0A0C4DH41 118 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 NPIPB5A8MRT5 1133 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 B4DEV8 164 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 TEX22C9J3V5 150 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 CLN5O75503 358 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 MSMBP08118 114 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 SRP19P09132 144 aaKnown RBP8.14□□□□□ -1.11
MSH5-213ENST00000468136 STAG3L2P0CL84 134 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 STAG3L3P0CL85 134 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 RNF224P0DH78 156 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 MYOD1P15172 320 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 TMEM11P17152 192 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 ADCYAP1P18509 176 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 ICAM4Q14773 271 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 LDLRAD2Q5SZI1 272 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 PRSS57Q6UWY2 283 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 PQLC2Q6ZP29 291 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 CYP2G1PQ6ZSU1 146 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 LHFPL4Q7Z7J7 247 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 RITA1Q96K30 269 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 MEGF9Q9H1U4 602 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 TMEM231Q9H6L2 316 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 TMEM167BQ9NRX6 74 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 RNF24Q9Y225 148 aa8.14□□□□□ -1.11
MSH5-213ENST00000468136 TRAV30A0A087WSZ9 112 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 IGHV1-69DA0A0B4J2H0 117 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 TCRBV4S1A1TA0A5B7 111 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 E7EUB6 86 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 F6UZH7 168 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 PDE6DO43924 150 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 YIF1AO95070 293 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 IGHV1-69P01742 117 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 HLA-DRB1P01911 266 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 HIST1H1BP16401 226 aaKnown RBP8.13□□□□□ -1.11
MSH5-213ENST00000468136 CTRB1P17538 263 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 S100A7P31151 101 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 CCL20P78556 96 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 MEF2BQ02080 365 aaPredicted RBP8.13□□□□□ -1.11
MSH5-213ENST00000468136 SRSF1Q07955 248 aaKnown RBP eCLIP8.13□□□□□ -1.112e-6■■□□□ 13.9
MSH5-213ENST00000468136 FXYD3Q14802 87 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 HAGHQ16775 308 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 CLEC12BQ2HXU8 276 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 MIC13Q5XKP0 118 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 CTRB2Q6GPI1 263 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 CLRN3Q8NCR9 226 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 STXBP6Q8NFX7 210 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 ABHD5Q8WTS1 349 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 MBD6Q96DN6 1003 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 RASL11BQ9BPW5 248 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 NIPSNAP3BQ9BS92 247 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 TUBA4BQ9H853 241 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 SLC25A22Q9H936 323 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 TPSG1Q9NRR2 321 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 TECRQ9NZ01 308 aaKnown RBP8.13□□□□□ -1.11
MSH5-213ENST00000468136 FUT9Q9Y231 359 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 RFNGQ9Y644 331 aa8.13□□□□□ -1.11
MSH5-213ENST00000468136 IGSF10Q6WRI0 2623 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 IGHV4-30-2A0A087WSY4 118 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 CENPVL3A0A0U1RRI6 287 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 ZFP92A6NM28 416 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 M0QZK8 103 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 OR5G3P0C626 314 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 LINC00869P0C866 280 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 DEFA4P12838 97 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 PAX6P26367 422 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 CNTFRP26992 372 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 OR10J1P30954 320 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 SAA4P35542 130 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 DLX1P56177 255 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 GNB1P62873 340 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 LOXL1Q08397 574 aaPredicted RBP8.12□□□□□ -1.11
MSH5-213ENST00000468136 KLK9Q2XQG4 91 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 C10orf55Q5SWW7 151 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 C16orf82Q7Z2V1 217 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 TTC9CQ8N5M4 171 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 TEX29Q8N6K0 151 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 LINC01356Q8N9X3 169 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 OR4X1Q8NH49 305 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 RXFP4Q8TDU9 374 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 SSMEM1Q8WWF3 244 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 ARPC1AQ92747 370 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 PERPQ96FX8 193 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 ZNF48Q96MX3 618 aaPredicted RBP8.12□□□□□ -1.11
MSH5-213ENST00000468136 SMCO4Q9NRQ5 59 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 KLK9Q9UKQ9 250 aa8.12□□□□□ -1.11
MSH5-213ENST00000468136 A0A1B0GV50 99 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 NCBP2LA6PVI3 153 aaKnown RBP8.11□□□□□ -1.11
MSH5-213ENST00000468136 C9JQL5 133 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 NPBWR1P48145 328 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 PLP1P60201 277 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 GUCA2BQ16661 112 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 SPNS3Q6ZMD2 512 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 TVP23CQ96ET8 276 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 MISP3Q96FF7 219 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 ACY3Q96HD9 319 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 ATP6V0BQ99437 205 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 RARRES2Q99969 163 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 TCEAL7Q9BRU2 100 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 WNT10AQ9GZT5 417 aa8.11□□□□□ -1.11
MSH5-213ENST00000468136 DNAJC4Q9NNZ3 241 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms