RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 IGHV3-21A0A0B4J1V1 117 aa11.43□□□□□ -0.58
ATG4B-215ENST00000468018 CTSGP08311 255 aa11.43□□□□□ -0.58
ATG4B-215ENST00000468018 IGHV4-30-4P0DP06 118 aa11.43□□□□□ -0.58
ATG4B-215ENST00000468018 FAUP35544 74 aaKnown RBP11.43□□□□□ -0.58
ATG4B-215ENST00000468018 AP3S2P59780 193 aa11.43□□□□□ -0.58
ATG4B-215ENST00000468018 SPINK9Q5DT21 86 aa11.43□□□□□ -0.58
ATG4B-215ENST00000468018 SBSPONQ8IVN8 264 aa11.43□□□□□ -0.58
ATG4B-215ENST00000468018 SGPP2Q8IWX5 399 aa11.43□□□□□ -0.58
ATG4B-215ENST00000468018 SDHCQ99643 169 aaPredicted RBP11.43□□□□□ -0.58
ATG4B-215ENST00000468018 TXN2Q99757 166 aa11.43□□□□□ -0.58
ATG4B-215ENST00000468018 MLXQ9UH92 298 aa11.43□□□□□ -0.58
ATG4B-215ENST00000468018 NDUFA4O00483 81 aa11.42□□□□□ -0.58
ATG4B-215ENST00000468018 MT-CO2P00403 227 aa11.42□□□□□ -0.58
ATG4B-215ENST00000468018 RNASE2P10153 161 aaKnown RBP11.42□□□□□ -0.58
ATG4B-215ENST00000468018 TM4SF20Q53R12 229 aa11.42□□□□□ -0.58
ATG4B-215ENST00000468018 SPANXN2Q5MJ10 180 aa11.42□□□□□ -0.58
ATG4B-215ENST00000468018 TMEM268Q5VZI3 342 aa11.42□□□□□ -0.58
ATG4B-215ENST00000468018 SLC35G3Q8N808 338 aa11.42□□□□□ -0.58
ATG4B-215ENST00000468018 MARC2Q969Z3 335 aa11.42□□□□□ -0.58
ATG4B-215ENST00000468018 GPR146Q96CH1 333 aa11.42□□□□□ -0.58
ATG4B-215ENST00000468018 PALMDQ9NP74 551 aa11.42□□□□□ -0.58
ATG4B-215ENST00000468018 GAR1Q9NY12 217 aaKnown RBP11.42□□□□□ -0.58
ATG4B-215ENST00000468018 NDUFA13Q9P0J0 144 aa11.42□□□□□ -0.58
ATG4B-215ENST00000468018 MRPL27Q9P0M9 148 aaKnown RBP11.42□□□□□ -0.58
ATG4B-215ENST00000468018 IGHV3-35A0A0C4DH35 117 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 ZNF320A2RRD8 509 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 IFNA17P01571 189 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 SPCS3P61009 180 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 NMSQ5H8A3 153 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 UXS1Q8NBZ7 420 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 DYNLRB2Q8TF09 96 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 MISP3Q96FF7 219 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 PDCD10Q9BUL8 212 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.41□□□□□ -0.58
ATG4B-215ENST00000468018 CACNG5Q9UF02 275 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 KCNIP3Q9Y2W7 256 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 UFC1Q9Y3C8 167 aa11.41□□□□□ -0.58
ATG4B-215ENST00000468018 A0A0B4J2A0 478 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 K7EMT4 169 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 MFAP4P55083 255 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 BAK1Q16611 211 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 TMEM128Q5BJH2 165 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 GTSCR1Q86UQ5 136 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 TMEM61Q8N0U2 210 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 OR10C1Q96KK4 312 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 ASCL2Q99929 193 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 SLC25A21Q9BQT8 299 aaPredicted RBP11.4□□□□□ -0.58
ATG4B-215ENST00000468018 DAZ1Q9NQZ3 744 aaKnown RBP11.4□□□□□ -0.58
ATG4B-215ENST00000468018 PRR13Q9NZ81 148 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 SHPKQ9UHJ6 478 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 U3KQK5 164 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 STAB2Q8WWQ8 2551 aa11.4□□□□□ -0.58
ATG4B-215ENST00000468018 TRAV25A0A0B4J276 109 aa11.39□□□□□ -0.59
ATG4B-215ENST00000468018 CORTO00230 105 aa11.39□□□□□ -0.59
ATG4B-215ENST00000468018 AKR1C4P17516 323 aa11.39□□□□□ -0.59
ATG4B-215ENST00000468018 HOXA1P49639 335 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-215ENST00000468018 Q56UQ5 140 aa11.39□□□□□ -0.59
ATG4B-215ENST00000468018 ZNF57Q68EA5 555 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-215ENST00000468018 LINC00322Q6ZN03 302 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-215ENST00000468018 UBAC2Q8NBM4 344 aa11.39□□□□□ -0.59
ATG4B-215ENST00000468018 RNASE11Q8TAA1 199 aaKnown RBP11.39□□□□□ -0.59
ATG4B-215ENST00000468018 WDR89Q96FK6 387 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-215ENST00000468018 TM2D3Q9BRN9 247 aa11.39□□□□□ -0.59
ATG4B-215ENST00000468018 FNDC4Q9H6D8 234 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-215ENST00000468018 TENM3Q9P273 2699 aa11.39□□□□□ -0.59
ATG4B-215ENST00000468018 C15orf62A8K5M9 175 aa11.38□□□□□ -0.59
ATG4B-215ENST00000468018 CD7P09564 240 aa11.38□□□□□ -0.59
ATG4B-215ENST00000468018 ANXA3P12429 323 aa11.38□□□□□ -0.59
ATG4B-215ENST00000468018 SNCAP37840 140 aa11.38□□□□□ -0.59
ATG4B-215ENST00000468018 SUB1P53999 127 aaKnown RBP eCLIP11.38□□□□□ -0.59
ATG4B-215ENST00000468018 SRPXP78539 464 aa11.38□□□□□ -0.59
ATG4B-215ENST00000468018 BTNL8Q6UX41 500 aa11.38□□□□□ -0.59
ATG4B-215ENST00000468018 LRTM2Q8N967 370 aa11.38□□□□□ -0.59
ATG4B-215ENST00000468018 TMEM170AQ8WVE7 144 aa11.38□□□□□ -0.59
ATG4B-215ENST00000468018 PINX1Q96BK5 328 aaKnown RBP11.38□□□□□ -0.59
ATG4B-215ENST00000468018 WWC2-AS2Q96NR7 200 aa11.38□□□□□ -0.59
ATG4B-215ENST00000468018 NEURL2Q9BR09 285 aa11.38□□□□□ -0.59
ATG4B-215ENST00000468018 DUXBA0A1W2PPF3 345 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 NUPL2O15504 423 aaKnown RBP11.37□□□□□ -0.59
ATG4B-215ENST00000468018 IGHV3-48P01763 117 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 SULT1A3P0DMM9 295 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 SULT1A4P0DMN0 295 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 HTR2BP41595 481 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 CCR6P51684 374 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 CD81P60033 236 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 RELQ04864 619 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-215ENST00000468018 RBMS2Q15434 407 aaKnown RBP11.37□□□□□ -0.59
ATG4B-215ENST00000468018 C2orf83Q53S99 150 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 LYZL2Q7Z4W2 148 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 LGI3Q8N145 548 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 MRPL36Q9P0J6 103 aaKnown RBP11.37□□□□□ -0.59
ATG4B-215ENST00000468018 HSPB7Q9UBY9 170 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 CACFD1Q9UGQ2 172 aa11.37□□□□□ -0.59
ATG4B-215ENST00000468018 NAP1L6A6NFF2 107 aa11.36□□□□□ -0.59
ATG4B-215ENST00000468018 GNG7O60262 68 aa11.36□□□□□ -0.59
ATG4B-215ENST00000468018 PITX3O75364 302 aa11.36□□□□□ -0.59
ATG4B-215ENST00000468018 TMEM50AO95807 157 aa11.36□□□□□ -0.59
ATG4B-215ENST00000468018 BTCP35070 178 aa11.36□□□□□ -0.59
ATG4B-215ENST00000468018 DUSP18Q8NEJ0 188 aa11.36□□□□□ -0.59
ATG4B-215ENST00000468018 ENY2Q9NPA8 101 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms