RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 G6PCP35575 357 aa1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 ANP32AP39687 249 aaKnown RBP1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 AKIRIN2Q53H80 203 aa1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 LCN15Q6UWW0 184 aa1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 OR4D11Q8NGI4 311 aa1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 TERB2Q8NHR7 220 aa1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 H1FXQ92522 213 aaKnown RBP1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 TMEM147Q9BVK8 224 aa1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 DCSTAMPQ9H295 470 aa1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 MIXL1Q9H2W2 232 aa1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 SOX21Q9Y651 276 aaPredicted RBP1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 CR1P17927 2039 aa1.67□□□□□ -2.14
GAPVD1-211ENST00000467707 A0A087WUJ7 227 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 IGKV2-40A0A087WW87 121 aaPredicted RBP1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 TMEM114B3SHH9 223 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 TCL1BO95988 128 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 IGKV2D-40P01614 121 aaPredicted RBP1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 UBBP0CG47 229 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 SMIM10L2AP0DMW4 78 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 SMIM10L2BP0DMW5 78 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 COX6A1P12074 109 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 KISS1Q15726 138 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 TMEM97Q5BJF2 176 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 DPPA3Q6W0C5 159 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 LINC00471Q8N535 108 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 ZNF439Q8NDP4 499 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 GINS4Q9BRT9 223 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 ADAT1Q9BUB4 502 aaKnown RBP1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 CCDC90BQ9GZT6 254 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 SLC39A9Q9NUM3 307 aa1.66□□□□□ -2.14
GAPVD1-211ENST00000467707 MUC6Q6W4X9 2439 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 SMIM9A6NGZ8 99 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 OR5F1O95221 314 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 CNIH1O95406 144 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 RPS20P60866 119 aaKnown RBP1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 CDK10Q15131 360 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 SPA17Q15506 151 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 KIAA2026Q5HYC2 2103 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 ZNF826PQ6ZT77 177 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 BPIFA4PQ86YQ2 179 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 KRT222Q8N1A0 295 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 GDPD1Q8N9F7 314 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 CT55Q8WUE5 264 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 GLTPQ9NZD2 209 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 TP73-AS1Q9UF72 201 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 TOPBP1Q92547 1522 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 RIC1Q4ADV7 1423 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 TTC21AQ8NDW8 1320 aa1.65□□□□□ -2.15
GAPVD1-211ENST00000467707 HAND1O96004 215 aa1.64□□□□□ -2.15
GAPVD1-211ENST00000467707 SHBGP04278 402 aa1.64□□□□□ -2.15
GAPVD1-211ENST00000467707 FADDQ13158 208 aa1.64□□□□□ -2.15
GAPVD1-211ENST00000467707 SPANXN5Q5MJ07 72 aa1.64□□□□□ -2.15
GAPVD1-211ENST00000467707 C12orf29Q8N999 325 aa1.64□□□□□ -2.15
GAPVD1-211ENST00000467707 SERPINI1Q99574 410 aa1.64□□□□□ -2.15
GAPVD1-211ENST00000467707 OR5AC2Q9NZP5 309 aa1.64□□□□□ -2.15
GAPVD1-211ENST00000467707 PTPRSQ13332 1948 aa1.64□□□□□ -2.15
GAPVD1-211ENST00000467707 NEO1Q92859 1461 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 CECR2Q9BXF3 1484 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 FN1P02751 2386 aaKnown RBP1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 hADV38S2A0JD32 116 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 S100A4P26447 101 aaKnown RBP1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 RUNX1Q01196 453 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 TRAPPC6BQ86SZ2 158 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 OOSP2Q86WS3 158 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 CLVS1Q8IUQ0 354 aaPredicted RBP1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 HIST3H2BBQ8N257 126 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 OR4E2Q8NGC2 313 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 DNAJC9Q8WXX5 260 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 C2orf50Q96LR7 162 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 PRAP1Q96NZ9 151 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 FBXO5Q9UKT4 447 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 ERGIC3Q9Y282 383 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 MALRD1Q5VYJ5 2156 aa1.63□□□□□ -2.15
GAPVD1-211ENST00000467707 IGKV3-7A0A075B6H7 116 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 FAM236DA0A1B0GTK5 79 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 J3QRK9 145 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 FADS1O60427 444 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 FAM236CP0DP71 79 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 AP3S2P59780 193 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 CDC42P60953 191 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 YPEL3P61236 119 aaPredicted RBP1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 ZNF846Q147U1 533 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 Q6ZQT0 140 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 Q8N2B8 174 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 C10orf105Q8TEF2 133 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 RETNLBQ9BQ08 111 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 TLNRD1Q9H1K6 362 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 RNF122Q9H9V4 155 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 PRELID3BQ9Y3B1 194 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 SETD5Q9C0A6 1442 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 CUL9Q8IWT3 2517 aa1.62□□□□□ -2.15
GAPVD1-211ENST00000467707 RTL1A6NKG5 1358 aa1.61□□□□□ -2.15
GAPVD1-211ENST00000467707 ROBO3Q96MS0 1386 aa1.61□□□□□ -2.15
GAPVD1-211ENST00000467707 GLI3P10071 1580 aa1.61□□□□□ -2.15
GAPVD1-211ENST00000467707 RB1CC1Q8TDY2 1594 aa1.61□□□□□ -2.15
GAPVD1-211ENST00000467707 BUB1B-PAK6H3BSN5 160 aa1.61□□□□□ -2.15
GAPVD1-211ENST00000467707 PDE6DO43924 150 aa1.61□□□□□ -2.15
GAPVD1-211ENST00000467707 OR2B3O76000 313 aa1.61□□□□□ -2.15
GAPVD1-211ENST00000467707 SERPINE1P05121 402 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms