RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 NXF2Q9GZY0 626 aaKnown RBP15.09■□□□□ 0.01
COL6A1-203ENST00000466285 KIAA1109Q2LD37 5005 aa15.08■□□□□ 0
COL6A1-203ENST00000466285 PRSS3P35030 304 aa15.08■□□□□ 0
COL6A1-203ENST00000466285 PRCDQ00LT1 54 aa15.08■□□□□ 0
COL6A1-203ENST00000466285 CMTM1Q8IZ96 169 aa15.08■□□□□ 0
COL6A1-203ENST00000466285 ZNF114Q8NC26 417 aa15.08■□□□□ 0
COL6A1-203ENST00000466285 OR6F1Q8NGZ6 308 aa15.08■□□□□ 0
COL6A1-203ENST00000466285 PINX1Q96BK5 328 aaKnown RBP15.08■□□□□ 0
COL6A1-203ENST00000466285 TMEM56Q96MV1 263 aa15.08■□□□□ 0
COL6A1-203ENST00000466285 ZFAND3Q9H8U3 227 aa15.08■□□□□ 0
COL6A1-203ENST00000466285 MRPL36Q9P0J6 103 aaKnown RBP15.08■□□□□ 0
COL6A1-203ENST00000466285 M0QYG6 137 aa15.07■□□□□ 0
COL6A1-203ENST00000466285 PI3P19957 117 aa15.07■□□□□ 0
COL6A1-203ENST00000466285 RNASE12Q5GAN4 147 aaKnown RBP15.07■□□□□ 0
COL6A1-203ENST00000466285 LEMD1Q68G75 181 aa15.07■□□□□ 0
COL6A1-203ENST00000466285 TOMM20LQ6UXN7 152 aa15.07■□□□□ 0
COL6A1-203ENST00000466285 SNX29P2Q8IUI4 249 aa15.07■□□□□ 0
COL6A1-203ENST00000466285 FAT2Q9NYQ8 4349 aa15.06■□□□□ 0
COL6A1-203ENST00000466285 A0A1B0GU03 582 aa15.06■□□□□ 0
COL6A1-203ENST00000466285 IGKV1-5P01602 117 aa15.06■□□□□ 0
COL6A1-203ENST00000466285 RPL5P46777 297 aaKnown RBP15.06■□□□□ 0
COL6A1-203ENST00000466285 MFAP4P55083 255 aa15.06■□□□□ 0
COL6A1-203ENST00000466285 NCS1P62166 190 aa15.06■□□□□ 0
COL6A1-203ENST00000466285 RELQ04864 619 aaPredicted RBP15.06■□□□□ 0
COL6A1-203ENST00000466285 TCF24Q7RTU0 167 aa15.06■□□□□ 0
COL6A1-203ENST00000466285 CSTL1Q9H114 145 aa15.06■□□□□ 0
COL6A1-203ENST00000466285 KLK5Q9Y337 293 aaPredicted RBP15.06■□□□□ 0
COL6A1-203ENST00000466285 OR11H2Q8NH07 326 aa15.05■□□□□ -0
COL6A1-203ENST00000466285 FUNDC2Q9BWH2 189 aa15.05■□□□□ -0
COL6A1-203ENST00000466285 FBXL17Q9UF56 701 aa15.05■□□□□ -0
COL6A1-203ENST00000466285 PCLOQ9Y6V0 5065 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 TRAV14DV4A0A0A6YYC5 116 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 MPTX1A8MV57 137 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 TMEM127O75204 238 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 GABARAPO95166 117 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 CA1P00915 261 aaPredicted RBP15.04■□□□□ -0
COL6A1-203ENST00000466285 P0C879 139 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 H2BFWTQ7Z2G1 175 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 CROCCP3Q8IVE0 287 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 OR4A16Q8NH70 328 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 TSC22D3Q99576 134 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 RARRES2Q99969 163 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 MS4A6AQ9H2W1 248 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 VSIRQ9H7M9 311 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 FKBP11Q9NYL4 201 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 COMMD3Q9UBI1 195 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 DNAH2Q9P225 4427 aa15.04■□□□□ -0
COL6A1-203ENST00000466285 A0A0G2JRQ6 117 aa15.03■□□□□ -0
COL6A1-203ENST00000466285 GNG7O60262 68 aa15.03■□□□□ -0
COL6A1-203ENST00000466285 DFFBO76075 338 aa15.03■□□□□ -0
COL6A1-203ENST00000466285 GIG44P09565 113 aaPredicted RBP15.03■□□□□ -0
COL6A1-203ENST00000466285 ELK1P19419 428 aa15.03■□□□□ -0
COL6A1-203ENST00000466285 DEFB131AP59861 70 aa15.03■□□□□ -0
COL6A1-203ENST00000466285 HSPE1P61604 102 aaKnown RBP15.03■□□□□ -0
COL6A1-203ENST00000466285 TP53RKQ96S44 253 aa15.03■□□□□ -0
COL6A1-203ENST00000466285 C11orf68Q9H3H3 251 aaKnown RBP15.03■□□□□ -0
COL6A1-203ENST00000466285 PUS1Q9Y606 427 aaKnown RBP eCLIP15.03■□□□□ -0
COL6A1-203ENST00000466285 A0A0B4J293 547 aa15.02■□□□□ -0
COL6A1-203ENST00000466285 HPGDSO60760 199 aa15.02■□□□□ -0
COL6A1-203ENST00000466285 TSPAN5P62079 268 aa15.02■□□□□ -0
COL6A1-203ENST00000466285 CTF1Q16619 201 aa15.02■□□□□ -0
COL6A1-203ENST00000466285 LGALS9CQ6DKI2 356 aa15.02■□□□□ -0
COL6A1-203ENST00000466285 TMEM217Q8N7C4 229 aa15.02■□□□□ -0
COL6A1-203ENST00000466285 GATAD1Q8WUU5 269 aa15.02■□□□□ -0
COL6A1-203ENST00000466285 FAM212BQ9NTI7 297 aaPredicted RBP15.02■□□□□ -0
COL6A1-203ENST00000466285 ST8SIA3O43173 380 aa15.01□□□□□ -0.01
COL6A1-203ENST00000466285 RNASE2P10153 161 aaKnown RBP15.01□□□□□ -0.01
COL6A1-203ENST00000466285 C4BPBP20851 252 aa15.01□□□□□ -0.01
COL6A1-203ENST00000466285 RCVRNP35243 200 aa15.01□□□□□ -0.01
COL6A1-203ENST00000466285 VBP1P61758 197 aa15.01□□□□□ -0.01
COL6A1-203ENST00000466285 MLANAQ16655 118 aa15.01□□□□□ -0.01
COL6A1-203ENST00000466285 GPR141Q7Z602 305 aa15.01□□□□□ -0.01
COL6A1-203ENST00000466285 TXN2Q99757 166 aa15.01□□□□□ -0.01
COL6A1-203ENST00000466285 NAA50Q9GZZ1 169 aaKnown RBP15.01□□□□□ -0.01
COL6A1-203ENST00000466285 FNDC4Q9H6D8 234 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-203ENST00000466285 PPP5CP53041 499 aa15□□□□□ -0.01
COL6A1-203ENST00000466285 UCP3P55916 312 aa15□□□□□ -0.01
COL6A1-203ENST00000466285 PVRIGQ6DKI7 326 aa15□□□□□ -0.01
COL6A1-203ENST00000466285 Q8NAQ8 132 aa15□□□□□ -0.01
COL6A1-203ENST00000466285 OR4D10Q8NGI6 311 aa15□□□□□ -0.01
COL6A1-203ENST00000466285 C11orf45Q8TAV5 145 aa15□□□□□ -0.01
COL6A1-203ENST00000466285 C6orf62Q9GZU0 229 aaPredicted RBP15□□□□□ -0.01
COL6A1-203ENST00000466285 APOA1P02647 267 aa14.99□□□□□ -0.01
COL6A1-203ENST00000466285 RBMS2Q15434 407 aaKnown RBP14.99□□□□□ -0.01
COL6A1-203ENST00000466285 LHFPL1Q86WI0 220 aa14.99□□□□□ -0.01
COL6A1-203ENST00000466285 RBM38Q9H0Z9 239 aaKnown RBP14.99□□□□□ -0.01
COL6A1-203ENST00000466285 SCPEP1Q9HB40 452 aa14.99□□□□□ -0.01
COL6A1-203ENST00000466285 DNAH17Q9UFH2 4485 aa14.99□□□□□ -0.01
COL6A1-203ENST00000466285 SP6Q3SY56 376 aa14.98□□□□□ -0.01
COL6A1-203ENST00000466285 ZNF600Q6ZNG1 722 aa14.98□□□□□ -0.01
COL6A1-203ENST00000466285 BCL7BQ9BQE9 202 aa14.98□□□□□ -0.01
COL6A1-203ENST00000466285 KLK11Q9UBX7 282 aa14.98□□□□□ -0.01
COL6A1-203ENST00000466285 KNCNA6PVL3 124 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 TMEM50AO95807 157 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 RBMY1A1P0DJD3 496 aaKnown RBP14.97□□□□□ -0.01
COL6A1-203ENST00000466285 RBMY1CP0DJD4 496 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 ETV6P41212 452 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 PIGPP57054 158 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 RND3P61587 244 aa14.97□□□□□ -0.01
COL6A1-203ENST00000466285 RBMY1FQ15415 496 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms