RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 TSPAN5P62079 268 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 TNFRSF9Q07011 255 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 PHLDA2Q53GA4 152 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 Q56UQ5 140 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 TMEM217Q8N7C4 229 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 STPG3Q8N7X2 389 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 UBAC2Q8NBM4 344 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 OR1P1Q8NH06 330 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 C6orf62Q9GZU0 229 aaPredicted RBP6.46□□□□□ -1.38
HDAC9-220ENST00000461409 SCPEP1Q9HB40 452 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 NSG2Q9Y328 171 aa6.46□□□□□ -1.38
HDAC9-220ENST00000461409 EPPK1P58107 5090 aaKnown RBP6.45□□□□□ -1.38
HDAC9-220ENST00000461409 A0A087WXM4 84 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 IGHV3-21A0A0B4J1V1 117 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 K7EIM0 57 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 APOA1P02647 267 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 HLA-DMAP28067 261 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 RCVRNP35243 200 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 CMC4P56277 68 aaPredicted RBP6.45□□□□□ -1.38
HDAC9-220ENST00000461409 DEFB135Q30KP9 77 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 ODF3L2Q3SX64 289 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 H2BFWTQ7Z2G1 175 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 OR4A16Q8NH70 328 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 GPX8Q8TED1 209 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 SLC25A46Q96AG3 418 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 YIPF6Q96EC8 236 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 CMTM3Q96MX0 182 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 TXN2Q99757 166 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 CHRDL1Q9BU40 450 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 FXYD6Q9H0Q3 95 aa6.45□□□□□ -1.38
HDAC9-220ENST00000461409 IGHV3OR16-8A0A075B7F1 116 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 A0A0J9YWU9 116 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 ZNF207O43670 478 aaKnown RBP6.44□□□□□ -1.38
HDAC9-220ENST00000461409 YIF1AO95070 293 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 TNFAIP8O95379 198 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 CD5P06127 495 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 CTSGP08311 255 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 FCGR2BP31994 310 aaPredicted RBP6.44□□□□□ -1.38
HDAC9-220ENST00000461409 TGFBR1P36897 503 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 MFAP4P55083 255 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 UCP3P55916 312 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 LSM3P62310 102 aaKnown RBP6.44□□□□□ -1.38
HDAC9-220ENST00000461409 PMS2P11Q13670 270 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 LYG2Q86SG7 212 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 TBC1D26Q86UD7 250 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 LYSMD2Q8IV50 215 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 ZNF114Q8NC26 417 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 TMEM116Q8NCL8 245 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 GALNT14Q96FL9 552 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 COMMD3Q9UBI1 195 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 UBQLN2Q9UHD9 624 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 SMPXQ9UHP9 88 aa6.44□□□□□ -1.38
HDAC9-220ENST00000461409 IGHV7-4-1A0A0J9YVY3 117 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 GNG7O60262 68 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 EIF4EP06730 217 aaKnown RBP6.43□□□□□ -1.38
HDAC9-220ENST00000461409 CTSDP07339 412 aaPredicted RBP6.43□□□□□ -1.38
HDAC9-220ENST00000461409 PAFAH1B2P68402 229 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 ERHP84090 104 aaKnown RBP6.43□□□□□ -1.38
HDAC9-220ENST00000461409 PRCDQ00LT1 54 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 SNX29P2Q8IUI4 249 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 LINC00476Q8WZB0 136 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 MRGPRFQ96AM1 343 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 RNF183Q96D59 192 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 SEC22AQ96IW7 307 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 OR10C1Q96KK4 312 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 RNF2Q99496 336 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 GINS3Q9BRX5 216 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 RHPN1-AS1Q9BWJ2 59 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 NXF2Q9GZY0 626 aaKnown RBP6.43□□□□□ -1.38
HDAC9-220ENST00000461409 MAP6D1Q9H9H5 199 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 KLK5Q9Y337 293 aaPredicted RBP6.43□□□□□ -1.38
HDAC9-220ENST00000461409 BIRC6Q9NR09 4857 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 ALMS1Q8TCU4 4167 aa6.43□□□□□ -1.38
HDAC9-220ENST00000461409 TRAV14DV4A0A0A6YYC5 116 aa6.42□□□□□ -1.38
HDAC9-220ENST00000461409 I3L2K1 104 aa6.42□□□□□ -1.38
HDAC9-220ENST00000461409 CHEK1O14757 476 aa6.42□□□□□ -1.38
HDAC9-220ENST00000461409 ATG12O94817 140 aa6.42□□□□□ -1.38
HDAC9-220ENST00000461409 LY6G6CO95867 125 aa6.42□□□□□ -1.38
HDAC9-220ENST00000461409 MT-CO2P00403 227 aa6.42□□□□□ -1.38
HDAC9-220ENST00000461409 RPL35AP18077 110 aaKnown RBP6.42□□□□□ -1.38
HDAC9-220ENST00000461409 SNCAP37840 140 aa6.42□□□□□ -1.38
HDAC9-220ENST00000461409 NPBWR1P48145 328 aa6.42□□□□□ -1.38
HDAC9-220ENST00000461409 HSPE1P61604 102 aaKnown RBP6.42□□□□□ -1.38
HDAC9-220ENST00000461409 CEMP1Q6PRD7 247 aaPredicted RBP6.42□□□□□ -1.38
HDAC9-220ENST00000461409 AP3S1Q92572 193 aa6.42□□□□□ -1.38
HDAC9-220ENST00000461409 PINX1Q96BK5 328 aaKnown RBP6.42□□□□□ -1.38
HDAC9-220ENST00000461409 ZNF486Q96H40 463 aaPredicted RBP6.42□□□□□ -1.38
HDAC9-220ENST00000461409 HYDINQ4G0P3 5121 aa6.42□□□□□ -1.38
HDAC9-220ENST00000461409 MPTX1A8MV57 137 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 CORTO00230 105 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 SCGB2A1O75556 95 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 IGKV1-39P01597 117 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 IGKV1D-39P04432 117 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 PGAM2P15259 253 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 TBPP20226 339 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 RORCP51449 518 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 AKR1C2P52895 323 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 SUB1P53999 127 aaKnown RBP eCLIP6.41□□□□□ -1.38
HDAC9-220ENST00000461409 RND3P61587 244 aa6.41□□□□□ -1.38
HDAC9-220ENST00000461409 NCS1P62166 190 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms