RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 RPEQ96AT9 228 aa9.8□□□□□ -0.84
SMPD4-213ENST00000454468 C2orf88Q9BSF0 95 aa9.8□□□□□ -0.84
SMPD4-213ENST00000454468 CBLN4Q9NTU7 201 aa9.8□□□□□ -0.84
SMPD4-213ENST00000454468 MYO18BQ8IUG5 2567 aa9.8□□□□□ -0.84
SMPD4-213ENST00000454468 CEACAM8P31997 349 aaPredicted RBP9.8□□□□□ -0.84
SMPD4-213ENST00000454468 UBE2L3P68036 154 aaKnown RBP9.8□□□□□ -0.84
SMPD4-213ENST00000454468 TCF23Q7RTU1 214 aa9.8□□□□□ -0.84
SMPD4-213ENST00000454468 TRAPPC1Q9Y5R8 145 aa9.8□□□□□ -0.84
SMPD4-213ENST00000454468 DOPEY2Q9Y3R5 2298 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 B4DEV8 164 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 CXorf1O96002 111 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 WNT2P09544 360 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 CDX1P47902 265 aaPredicted RBP9.79□□□□□ -0.84
SMPD4-213ENST00000454468 RND2P52198 227 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 LGALS4P56470 323 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 RANP62826 216 aaKnown RBP9.79□□□□□ -0.84
SMPD4-213ENST00000454468 GNB2P62879 340 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 OR4X1Q8NH49 305 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 P2RX4Q99571 388 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 TUBA4BQ9H853 241 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 LRBAP50851 2863 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 IGLV3-9A0A075B6K5 115 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 ZNF705FA8MVS1 300 aaPredicted RBP9.79□□□□□ -0.84
SMPD4-213ENST00000454468 E7EQL1 145 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 NPSP0C0P6 89 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 LINC00869P0C866 280 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 ZNF705DP0CH99 300 aaPredicted RBP9.79□□□□□ -0.84
SMPD4-213ENST00000454468 ZNF705BP0CI00 300 aaPredicted RBP9.79□□□□□ -0.84
SMPD4-213ENST00000454468 LY6DQ14210 128 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 EFNB3Q15768 340 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 CYP2G1PQ6ZSU1 146 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 OR1L8Q8NGR8 309 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 TEX50A0A1B0GTY4 177 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 GRIFINA4D1Z8 144 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 F2RL2O00254 374 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 SCGB1D1O95968 90 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 RBP4P02753 201 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 GCHFRP30047 84 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 VMA21Q3ZAQ7 101 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 C1QL4Q86Z23 238 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 IMMP2LQ96T52 175 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 GSX1Q9H4S2 264 aaPredicted RBP9.79□□□□□ -0.84
SMPD4-213ENST00000454468 CENPEQ02224 2701 aa9.79□□□□□ -0.84
SMPD4-213ENST00000454468 TRAV1-1A0A0B4J248 108 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 PACRGQ96M98 296 aaPredicted RBP9.78□□□□□ -0.84
SMPD4-213ENST00000454468 VPS25Q9BRG1 176 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 KCNIP2Q9NS61 270 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 TIMM9Q9Y5J7 89 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 TRAV34A0A0B4J273 112 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 SEC14L6B5MCN3 397 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 M0R143 59 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 THBDP07204 575 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 SOD3P08294 240 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 TIGITQ495A1 244 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 LEMD1Q68G75 181 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 PQLC2Q6ZP29 291 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 ZNF114Q8NC26 417 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 C22orf15Q8WYQ4 148 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 FAM103A1Q9BTL3 118 aaKnown RBP9.78□□□□□ -0.84
SMPD4-213ENST00000454468 PRDM13Q9H4Q3 707 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 LINC00312Q9Y6C7 94 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 USP9YO00507 2555 aaPredicted RBP9.78□□□□□ -0.84
SMPD4-213ENST00000454468 NCBP2LA6PVI3 153 aaKnown RBP9.78□□□□□ -0.84
SMPD4-213ENST00000454468 TMEM178BH3BS89 294 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 GNG4P50150 75 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 KIAA1644Q3SXP7 199 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 LBHQ53QV2 105 aaPredicted RBP9.78□□□□□ -0.84
SMPD4-213ENST00000454468 MRPL54Q6P161 138 aaKnown RBP9.78□□□□□ -0.84
SMPD4-213ENST00000454468 OR10G8Q8NGN5 311 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 TPSG1Q9NRR2 321 aa9.78□□□□□ -0.84
SMPD4-213ENST00000454468 A0A1B0GW64 132 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 UPK2O00526 184 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 SAPCD1Q5SSQ6 148 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 Q8NA96 180 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 OR5AU1Q8NGC0 362 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 ZNF835Q9Y2P0 537 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 IGHV3-35A0A0C4DH35 117 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 A0A1B0GUS0 222 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 PMS2P5A8MQ11 134 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 PYYP10082 97 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 IL3RAP26951 378 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 SUB1P53999 127 aaKnown RBP eCLIP9.77□□□□□ -0.859e-7■■■□□ 17.7
SMPD4-213ENST00000454468 BAGE3Q86Y29 109 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 BAGE2Q86Y30 109 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 PNKDQ8N490 385 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 CORO2AQ92828 525 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 SSBP3Q9BWW4 388 aaPredicted RBP9.77□□□□□ -0.85
SMPD4-213ENST00000454468 FBXL15Q9H469 300 aa9.77□□□□□ -0.85
SMPD4-213ENST00000454468 LOC102724200A0A096LPH7 203 aaPredicted RBP9.76□□□□□ -0.85
SMPD4-213ENST00000454468 HELTA6NFD8 242 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 TMEM250H0YL14 139 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 LHBP01229 141 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 CNTFRP26992 372 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 VDAC2P45880 294 aaPredicted RBP9.76□□□□□ -0.85
SMPD4-213ENST00000454468 IER3P46695 156 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 PRSS8Q16651 343 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 CLEC2AQ6UVW9 174 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 OR4C13Q8NGP0 309 aa9.76□□□□□ -0.85
SMPD4-213ENST00000454468 OCC1Q8TAD7 63 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms