RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 A0A1W2PPQ1 181 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 B4DEV8 164 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 CCSO14618 274 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 ZFPL1O95159 310 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 LYPD3O95274 346 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 IGKV1D-16P01601 117 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 AANATQ16613 207 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 TMEM255AQ5JRV8 349 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 FAM71F2Q6NXP2 309 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 ERASQ7Z444 233 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 C10orf111Q8N326 155 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 OR8D4Q8NGM9 314 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 C11orf45Q8TAV5 145 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 TMEM191AQ9H0A3 160 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 ZNF696Q9H7X3 374 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 OR5AC2Q9NZP5 309 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 SIGLEC9Q9Y336 463 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 PATJQ8NI35 1801 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 MUC6Q6W4X9 2439 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 MYH14Q7Z406 1995 aaKnown RBP3.72□□□□□ -1.81
LRRK2-204ENST00000430804 PQLC2LA1A4F0 135 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 NUPR2A6NF83 97 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 NHLRC4P0CG21 123 aaPredicted RBP3.72□□□□□ -1.81
LRRK2-204ENST00000430804 RPS11P62280 158 aaKnown RBP eCLIP3.72□□□□□ -1.81
LRRK2-204ENST00000430804 SUMO1P63165 101 aaKnown RBP3.72□□□□□ -1.81
LRRK2-204ENST00000430804 TCTEX1D4Q5JR98 221 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 RIMKLAQ8IXN7 391 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 CADM3Q8N126 398 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 FAM103A1Q9BTL3 118 aaKnown RBP3.72□□□□□ -1.81
LRRK2-204ENST00000430804 ST20Q9HBF5 79 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 CEP250Q9BV73 2442 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 MYO10Q9HD67 2058 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 IFITM10A6NMD0 228 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 TTRP02766 147 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 CSN3P07498 182 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 RNF125Q96EQ8 232 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 LINC00477Q96M19 166 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 ANAPC10Q9UM13 185 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 RTTNQ86VV8 2226 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 TRAV24A0A0B4J272 114 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 CTXND1A0A1B0GTU2 59 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 BUB1B-PAK6H3BSN5 160 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 MLNRO43193 412 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 NAPSAO96009 420 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 WDR82Q6UXN9 313 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 ZAR1Q86SH2 424 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 RNF182Q8N6D2 247 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 CFHR4Q92496 578 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 ZNF503Q96F45 646 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 THADAQ6YHU6 1953 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 RBFOX3A6NFN3 312 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 SRRM5B3KS81 715 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 C11orf94C9JXX5 98 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 IGKV1D-12P01611 117 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 CD24P25063 80 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 OR10G8Q8NGN5 311 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 OR1P1Q8NH06 330 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 VCX2Q9H322 139 aa3.72□□□□□ -1.81
LRRK2-204ENST00000430804 IGKV1OR2-108A0A075B7D4 117 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 PINLYPA6NC86 204 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 LINC01548A6NM66 108 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 M0R2Z0 102 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 OVOL3O00110 214 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 HLA-DQA1P01909 254 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 JUNBP17275 347 aaPredicted RBP3.71□□□□□ -1.81
LRRK2-204ENST00000430804 FHITP49789 147 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 UBE2D1P51668 147 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 ICAM4Q14773 271 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 BAK1Q16611 211 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 C6orf226Q5I0X4 101 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 C12orf73Q69YU5 71 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 ZNF705AQ6ZN79 300 aaPredicted RBP3.71□□□□□ -1.81
LRRK2-204ENST00000430804 STPG2Q8N412 459 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 XCL2Q9UBD3 114 aa3.71□□□□□ -1.81
LRRK2-204ENST00000430804 TRBV20OR9-2A0A075B6H5 130 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 IGHV4-30-2A0A087WSY4 118 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 FABP5P3A8MUU1 101 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 NAT1P18440 290 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 SUPT4H1P63272 117 aaKnown RBP3.71□□□□□ -1.82
LRRK2-204ENST00000430804 FAM74A3Q4VXF1 159 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 TMEM200BQ69YZ2 307 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 OR4D11Q8NGI4 311 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 SPAG8Q99932 426 aaPredicted RBP3.71□□□□□ -1.82
LRRK2-204ENST00000430804 GSX1Q9H4S2 264 aaPredicted RBP3.71□□□□□ -1.82
LRRK2-204ENST00000430804 TRAV8-1A0A0A6YYK1 113 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 UPK1BO75841 260 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 NDUFB6O95139 128 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 IGHV3-53P01767 116 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 ZNF250P15622 560 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 ERCC8Q13216 396 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 C8orf82Q6P1X6 216 aaPredicted RBP3.71□□□□□ -1.82
LRRK2-204ENST00000430804 HIST1H2BAQ96A08 127 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 CTHRC1Q96CG8 243 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 S4R3C0 116 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 TCF20Q9UGU0 1960 aaKnown RBP3.71□□□□□ -1.82
LRRK2-204ENST00000430804 COL6A6A6NMZ7 2263 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 TRBV25-1A0A075B6N4 114 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 TRAV25A0A0B4J276 109 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 TGFBR3LH3BV60 316 aa3.71□□□□□ -1.82
LRRK2-204ENST00000430804 IGHV2-5P01817 119 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms