RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 ABRACLQ9P1F3 81 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 COPZ2Q9P299 210 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 FBXL3Q9UKT7 428 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 RBMX2Q9Y388 322 aaKnown RBP1.2□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF337Q9Y3M9 751 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 MMACHCQ9Y4U1 282 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 ICOSQ9Y6W8 199 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 NCKAP5O14513 1909 aa1.2□□□□□ -2.22
PTPRC-208ENST00000427110 DNAH14Q0VDD8 3507 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SPTBN5Q9NRC6 3674 aaKnown RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 IGKV1D-42A0A075B6H8 117 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 TRAV27A0A087WT01 109 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 A0A0B4J2C4 111 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 DAPL1A0PJW8 107 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 LINC00862A6NCI5 91 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 NAP1L6A6NFF2 107 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 TLCD2A6NGC4 264 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF860A6NHJ4 632 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 FAM183AA6NL82 134 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 OR4C45A6NMZ5 311 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 IFITM5A6NNB3 132 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 OR2AT4A6NND4 320 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 CD300LBA8K4G0 201 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 FAM25AB3EWG3 89 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 FAM25CB3EWG5 89 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 FAM25GB3EWG6 89 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF879B4DU55 563 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 LRRN3E7EW58 273 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 INMT-MINDY4F8WBC2 141 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 H3BP45 60 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 GABARAPH6UMI1 98 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 J3QLW9 94 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 AIPO00170 330 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SULT1C2O00338 296 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 PDCD5O14737 125 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 PHYHO14832 338 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 TOX3O15405 576 aaPredicted RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 PIN1P1O15428 100 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ORC5O43913 435 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 FADS1O60427 444 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 HPGDSO60760 199 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 LDOC1O95751 146 aaPredicted RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 IGHMP01871 453 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 STATHP02808 62 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 TRGV3P03979 118 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 TCRBP04435 133 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 IFNA16P05015 189 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 IL5P05113 134 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SOD3P08294 240 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 CD14P08571 375 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SULT1A3P0DMM9 295 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SULT1A4P0DMN0 295 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 CTSEP14091 401 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 HIST1H1CP16403 213 aaKnown RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SPI1P17947 270 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ATF1P18846 271 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 CSRP1P21291 193 aaKnown RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 PRTN3P24158 256 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 COL8A2P25067 703 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 S100A2P29034 98 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 PYCR1P32322 319 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 CAPZBP47756 277 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 DNASE1L1P49184 302 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 BLVRAP53004 296 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 CAV3P56539 151 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 UBE2KP61086 200 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 BTG2P78543 158 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 HOXC5Q00444 222 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 MEF2BQ02080 365 aaPredicted RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SSBP1Q04837 148 aaKnown RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SKP2Q13309 424 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ENDOGQ14249 297 aaKnown RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ANGPT1Q15389 498 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 GUSBP1Q15486 140 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SLC9A3R2Q15599 337 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF791Q3KP31 576 aaPredicted RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 LINC00303Q3SY05 128 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ACSM3Q53FZ2 586 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 Q5BKY6 102 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ACTL10Q5JWF8 245 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 CLEC12AQ5QGZ9 265 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 TRIQKQ629K1 86 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 LAMTOR1Q6IAA8 161 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SFXN4Q6P4A7 337 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF767PQ75MW2 155 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SSX6Q7RTT6 188 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 LRP11Q86VZ4 500 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 GKN2Q86XP6 184 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 LYPD6Q86Y78 171 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 OR6V1Q8N148 313 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SPICQ8N5J4 248 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 YIPF7Q8N8F6 280 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 PLPP5Q8NEB5 264 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 OR52R1Q8NGF1 315 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 OR5H6Q8NGV6 325 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 OR2T4Q8NH00 348 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 OR5J2Q8NH18 312 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 PFN4Q8NHR9 129 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ANGPTL6Q8NI99 470 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 GRPEL2Q8TAA5 225 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms