RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 C18orf65Q6ZTR6 163 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 IGHV3-35A0A0C4DH35 117 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 SMCO3A2RU48 225 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 AKIRIN2Q53H80 203 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 C19orf54Q5BKX5 351 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 LAMTOR1Q6IAA8 161 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 ACOT7LQ6ZUV0 252 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 OR5C1Q8NGR4 320 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 WFDC1Q9HC57 220 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 TRRAPQ9Y4A5 3859 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 PMS2P5A8MQ11 134 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 RPLP1P05386 114 aaKnown RBP10.49□□□□□ -0.73
PRPF39-202ENST00000424478 HTR2BP41595 481 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 TMEM14EPQ6UXP3 125 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 JMJD8Q96S16 334 aa10.49□□□□□ -0.73
PRPF39-202ENST00000424478 TSC22D2O75157 780 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 SLC25A4P12235 298 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 TPPP2P59282 170 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 RHOGP84095 191 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 KHDC1LQ5JSQ8 128 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 TTC9CQ8N5M4 171 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 KLHDC1Q8N7A1 406 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 INO80EQ8NBZ0 244 aaPredicted RBP10.48□□□□□ -0.73
PRPF39-202ENST00000424478 ACY3Q96HD9 319 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 HSPB11Q9Y547 144 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 U3KQ87 197 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 PSMB11A5LHX3 300 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 MT-CO2P00403 227 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 TRGV3P03979 118 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 LYL1P12980 280 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 P2RY1P47900 373 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 BSXQ3C1V8 233 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 CIB3Q96Q77 187 aaPredicted RBP10.48□□□□□ -0.73
PRPF39-202ENST00000424478 FBXL17Q9UF56 701 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 FBXL7Q9UJT9 491 aa10.48□□□□□ -0.73
PRPF39-202ENST00000424478 A0A1W2PRX2 142 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 TCTEX1D4Q5JR98 221 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 FAM110DQ8TAY7 271 aaPredicted RBP10.47□□□□□ -0.73
PRPF39-202ENST00000424478 TSPAN9O75954 239 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 CFHR3Q02985 330 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 C15orf32Q32M92 178 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 KRTAP24-1Q3LI83 254 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 ARL6Q9H0F7 186 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 IGLV11-55A0A075B6I3 123 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 IGHV3OR16-8A0A075B7F1 116 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 NPIPB5A8MRT5 1133 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 CRYGCP07315 174 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 SLC38A11Q08AI6 406 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 C2orf83Q53S99 150 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 Q8N2B8 174 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 C9orf62Q8N4C0 152 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 OR5AU1Q8NGC0 362 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 OR1P1Q8NH06 330 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 DUX3Q96PT4 197 aa10.47□□□□□ -0.73
PRPF39-202ENST00000424478 UBE2L5PA0A1B0GUS4 154 aa10.46□□□□□ -0.73
PRPF39-202ENST00000424478 PRSS46E5RG02 174 aa10.46□□□□□ -0.73
PRPF39-202ENST00000424478 K7EIM0 57 aa10.46□□□□□ -0.73
PRPF39-202ENST00000424478 TRBV12-3P01733 135 aa10.46□□□□□ -0.73
PRPF39-202ENST00000424478 SULT1A1P50225 295 aa10.46□□□□□ -0.73
PRPF39-202ENST00000424478 STX12Q86Y82 276 aa10.46□□□□□ -0.73
PRPF39-202ENST00000424478 LILRB2Q8N423 598 aa10.46□□□□□ -0.73
PRPF39-202ENST00000424478 SCARB1Q8WTV0 552 aa10.46□□□□□ -0.73
PRPF39-202ENST00000424478 RNF114Q9Y508 228 aa10.46□□□□□ -0.73
PRPF39-202ENST00000424478 CD28P10747 220 aa10.46□□□□□ -0.74
PRPF39-202ENST00000424478 KRTAP10-3P60369 221 aa10.46□□□□□ -0.74
PRPF39-202ENST00000424478 ZFP57Q9NU63 452 aa10.46□□□□□ -0.74
PRPF39-202ENST00000424478 ANKRD34BA5PLL1 514 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 DEFB136Q30KP8 78 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 LURAP1LQ8IV03 231 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 OR10P1Q8NGE3 313 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 ASB13Q8WXK3 278 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 HYLS1Q96M11 299 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 RAB11AP62491 216 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 RUNX1Q01196 453 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 RPL7L1Q6DKI1 246 aaKnown RBP10.45□□□□□ -0.74
PRPF39-202ENST00000424478 AQP10Q96PS8 301 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 I3L2K1 104 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 GATA2P23769 480 aaPredicted RBP10.45□□□□□ -0.74
PRPF39-202ENST00000424478 RAB9AP51151 201 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 RND2P52198 227 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 TAS2R30P59541 319 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 GAMTQ14353 236 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 TMUB2Q71RG4 321 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 NPIPB3Q92617 1050 aa10.45□□□□□ -0.74
PRPF39-202ENST00000424478 IGKV1OR2-108A0A075B7D4 117 aa10.44□□□□□ -0.74
PRPF39-202ENST00000424478 OR2T8A6NH00 312 aa10.44□□□□□ -0.74
PRPF39-202ENST00000424478 PPP5D1E7EU14 171 aa10.44□□□□□ -0.74
PRPF39-202ENST00000424478 IGLV1-40P01703 118 aa10.44□□□□□ -0.74
PRPF39-202ENST00000424478 NUP62P37198 522 aaPredicted RBP10.44□□□□□ -0.74
PRPF39-202ENST00000424478 SUB1P53999 127 aaKnown RBP eCLIP10.44□□□□□ -0.74
PRPF39-202ENST00000424478 SLC16A13Q7RTY0 426 aa10.44□□□□□ -0.74
PRPF39-202ENST00000424478 INS-IGF2F8WCM5 200 aa10.44□□□□□ -0.74
PRPF39-202ENST00000424478 EIF3GO75821 320 aaKnown RBP eCLIP10.44□□□□□ -0.74
PRPF39-202ENST00000424478 PSMB8P28062 276 aa10.44□□□□□ -0.74
PRPF39-202ENST00000424478 CRIP2P52943 208 aaPredicted RBP10.44□□□□□ -0.74
PRPF39-202ENST00000424478 ACSM6Q6P461 480 aa10.44□□□□□ -0.74
PRPF39-202ENST00000424478 TMEM65Q6PI78 240 aa10.44□□□□□ -0.74
PRPF39-202ENST00000424478 ZNF114Q8NC26 417 aa10.44□□□□□ -0.74
PRPF39-202ENST00000424478 SLC25A31Q9H0C2 315 aa10.44□□□□□ -0.74
PRPF39-202ENST00000424478 GNB4Q9HAV0 340 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms