RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 M0R1W7 72 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 SCO1O75880 301 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 HSPB1P04792 205 aaKnown RBP8□□□□□ -1.13
CMSS1-201ENST00000421999 DLX6P56179 175 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 TPTE2P1Q5T6R2 138 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 MINOS1Q5TGZ0 78 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 C22orf34Q6ZV56 151 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 BEX4Q9NWD9 120 aaPredicted RBP8□□□□□ -1.13
CMSS1-201ENST00000421999 MINOS1-NBL1R4GNA1 71 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 HELTA6NFD8 242 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 CFDP00746 253 aaPredicted RBP8□□□□□ -1.13
CMSS1-201ENST00000421999 SEC11BP0C7V7 166 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 CFPP27918 469 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 GUSBP1Q15486 140 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 EFNB3Q15768 340 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 RUSC1-AS1Q66K80 236 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 PRNTQ86SH4 94 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 C9orf62Q8N4C0 152 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 FGF23Q9GZV9 251 aaPredicted RBP8□□□□□ -1.13
CMSS1-201ENST00000421999 SLC35B3Q9H1N7 401 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 SPTBN5Q9NRC6 3674 aaKnown RBP8□□□□□ -1.13
CMSS1-201ENST00000421999 IGHV1-3A0A0C4DH29 117 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 UPK2O00526 184 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 RRHO14718 337 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 SFTA3P0C7M3 94 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 SNRPD3P62318 126 aaKnown RBP8□□□□□ -1.13
CMSS1-201ENST00000421999 TMEM88Q6PEY1 159 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 DUX4L9Q6RFH8 374 aaPredicted RBP8□□□□□ -1.13
CMSS1-201ENST00000421999 PQLC2Q6ZP29 291 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 LINC00469Q8N7U9 141 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 IFI27L2Q9H2X8 130 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 MANBALQ9NQG1 85 aa8□□□□□ -1.13
CMSS1-201ENST00000421999 PRRC2AP48634 2157 aaKnown RBP8□□□□□ -1.13
CMSS1-201ENST00000421999 SLC31A2O15432 143 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 RND3P61587 244 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 SMIM8Q96KF7 97 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 NABP2Q9BQ15 211 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 MMP26Q9NRE1 261 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 OR2T8A6NH00 312 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 OR11H4Q8NGC9 324 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 RAX2Q96IS3 184 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 SORL1Q92673 2214 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 RAB19A4D1S5 217 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 P01737 135 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 AMY1AP04745 511 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 C8orf88P0DMB2 117 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 ATP5IP56385 69 aaPredicted RBP7.99□□□□□ -1.13
CMSS1-201ENST00000421999 KRTAP27-1Q3LI81 207 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 SPRNQ5BIV9 151 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 DGAT2L7PQ6IED9 249 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 IL17RELQ6ZVW7 336 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 SGK494Q96LW2 274 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 MTORP42345 2549 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 DOCK11Q5JSL3 2073 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 PSMB11A5LHX3 300 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 OR9G9P0C7N8 305 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 GATA4P43694 442 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 ERVK11-1P61568 191 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 NKX6-2Q9C056 277 aaPredicted RBP7.99□□□□□ -1.13
CMSS1-201ENST00000421999 VAX2Q9UIW0 290 aa7.99□□□□□ -1.13
CMSS1-201ENST00000421999 KLF2Q9Y5W3 355 aaPredicted RBP7.99□□□□□ -1.13
CMSS1-201ENST00000421999 C20orf202A1L168 122 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 AGAP20933 346 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 GATA3P23771 443 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 RAB9AP51151 201 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 RRN3P1Q2M238 152 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 LHFPL1Q86WI0 220 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 RAB24Q969Q5 203 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 AP1S3Q96PC3 154 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 TXN2Q99757 166 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 TNRC6BQ9UPQ9 1833 aaKnown RBP7.98□□□□□ -1.13
CMSS1-201ENST00000421999 TRAV41A0A0B4J266 112 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 OOSP1A8MZH6 123 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 CXCL2P19875 107 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 HIST1H1AQ02539 215 aaPredicted RBP7.98□□□□□ -1.13
CMSS1-201ENST00000421999 MSMPQ1L6U9 139 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 CLLU1Q5K131 121 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 TEX45Q8NA69 505 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 C12orf57Q99622 126 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 TRAF4Q9BUZ4 470 aaPredicted RBP7.98□□□□□ -1.13
CMSS1-201ENST00000421999 RAB5AP20339 215 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 GATA2P23769 480 aaPredicted RBP7.98□□□□□ -1.13
CMSS1-201ENST00000421999 GATAD1Q8WUU5 269 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 ZNRD1Q9P1U0 126 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 NAT8BQ9UHF3 227 aa7.98□□□□□ -1.13
CMSS1-201ENST00000421999 FN1P02751 2386 aaKnown RBP7.98□□□□□ -1.13
CMSS1-201ENST00000421999 BUB1B-PAK6H3BSN5 160 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 RBFOX2O43251 390 aaKnown RBP eCLIP7.97□□□□□ -1.131e-6■■■■■ 27.4
CMSS1-201ENST00000421999 SIAH2O43255 324 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 CD8AP01732 235 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 BSXQ3C1V8 233 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 IGSF23A1L1A6 192 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 LINC00205P59089 165 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 HERPUD1Q15011 391 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 KLF17Q5JT82 389 aaPredicted RBP7.97□□□□□ -1.13
CMSS1-201ENST00000421999 CYYR1Q96J86 154 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 ELOA3CA0A087WX78 387 aaPredicted RBP7.97□□□□□ -1.13
CMSS1-201ENST00000421999 WIPF3A6NGB9 483 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 IFITM2Q01629 132 aa7.97□□□□□ -1.13
CMSS1-201ENST00000421999 DEFB113Q30KQ7 82 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms