RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 DPH3Q96FX2 82 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 NABP2Q9BQ15 211 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 ZNF319Q9P2F9 582 aa8.9□□□□□ -0.98
PTCH1-206ENST00000421141 HIVEP2P31629 2446 aa8.9□□□□□ -0.99
PTCH1-206ENST00000421141 IGHV1-3A0A0C4DH29 117 aa8.9□□□□□ -0.99
PTCH1-206ENST00000421141 FAM74A7A6NL05 159 aa8.9□□□□□ -0.99
PTCH1-206ENST00000421141 TRBV7-1A0A0A6YYK4 115 aa8.9□□□□□ -0.99
PTCH1-206ENST00000421141 UPK2O00526 184 aa8.9□□□□□ -0.99
PTCH1-206ENST00000421141 PMCHP20382 165 aa8.9□□□□□ -0.99
PTCH1-206ENST00000421141 ANOS1P23352 680 aa8.9□□□□□ -0.99
PTCH1-206ENST00000421141 TFF1P04155 84 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 GCSHP23434 173 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 TCL1AP56279 114 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 LEMD1Q68G75 181 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 FAM90A9PA6NNJ1 464 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 RAMP3O60896 148 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 EFNB3Q15768 340 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 AANATQ16613 207 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 SAPCD1Q5SSQ6 148 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 Q71RC1 249 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-206ENST00000421141 MAPK1IP1LQ8NDC0 245 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 ANGPTL6Q8NI99 470 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 LHFPL5Q8TAF8 219 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 LINC01587Q99440 93 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 PROK2Q9HC23 129 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 UCP1P25874 307 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 GPX4P36969 197 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-206ENST00000421141 MFAP2P55001 183 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 DMRTA2Q96SC8 542 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 REG4Q9BYZ8 158 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 SONP18583 2426 aaKnown RBP8.89□□□□□ -0.99
PTCH1-206ENST00000421141 CBY3A6NI87 242 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 OR9G9P0C7N8 305 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 USMG5Q96IX5 58 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 ST6GAL2Q96JF0 529 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 GAFA1Q96PS6 74 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 RNF5Q99942 180 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 CPAMD8Q8IZJ3 1885 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 GGCTO75223 188 aaKnown RBP8.89□□□□□ -0.99
PTCH1-206ENST00000421141 HGFACQ04756 655 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 ZNF362Q5T0B9 420 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-206ENST00000421141 DMRTC2Q8IXT2 367 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-206ENST00000421141 HSPB8Q9UJY1 196 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 PTTG1IPP53801 180 aa8.89□□□□□ -0.99
PTCH1-206ENST00000421141 OR4C46A6NHA9 309 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 TRGC1P0CF51 173 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 BCL2P10415 239 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 CD99P14209 185 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 PACRGQ96M98 296 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-206ENST00000421141 TNCP24821 2201 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 TEX50A0A1B0GTY4 177 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 FOXI3A8MTJ6 420 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-206ENST00000421141 PRSS1P07477 247 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 RUNX1Q01196 453 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 ZNF56Q15929 161 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 C19orf54Q5BKX5 351 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 PAX1P15863 534 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 DUTP33316 252 aaKnown RBP8.88□□□□□ -0.99
PTCH1-206ENST00000421141 DEFB113Q30KQ7 82 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 CRISP2P16562 243 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 BET1LQ9NYM9 111 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 PIEZO2Q9H5I5 2752 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 CD177Q8N6Q3 437 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 OR10C1Q96KK4 312 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 FBLN5Q9UBX5 448 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 RBFOX2O43251 390 aaKnown RBP eCLIP8.88□□□□□ -0.99
PTCH1-206ENST00000421141 ZNF585BQ52M93 769 aa8.88□□□□□ -0.99
PTCH1-206ENST00000421141 APCSP02743 223 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 IBA57Q5T440 356 aaKnown RBP8.87□□□□□ -0.99
PTCH1-206ENST00000421141 PVRIGQ6DKI7 326 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 GOLT1AQ6ZVE7 132 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 AQP10Q96PS8 301 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 SDF2L1Q9HCN8 221 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 DKK4Q9UBT3 224 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 FAM215AQ9Y5M1 114 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 EMP1P54849 157 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 ZNF600Q6ZNG1 722 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 MAP1LC3CQ9BXW4 147 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 PRORYQ9H606 182 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 EXPH5Q8NEV8 1989 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 Q1RN00 199 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 ATG2AQ2TAZ0 1938 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 RAI1Q7Z5J4 1906 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-206ENST00000421141 C7orf66A4D0T2 115 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 HLA-DRB1P01911 266 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 UBE2E1P51965 193 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 C15orf32Q32M92 178 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 NHLRC3Q5JS37 347 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 KLHDC1Q8N7A1 406 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 TMEM37Q8WXS4 190 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 IGHV2-70DA0A0C4DH43 119 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 FAM71F2Q6NXP2 309 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 CACNA1AO00555 2505 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 EGR1P18146 543 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 CKS2P33552 79 aa8.87□□□□□ -0.99
PTCH1-206ENST00000421141 MEF2BQ02080 365 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-206ENST00000421141 FAM223BA6NKX1 122 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 CSN3P07498 182 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 SMUG1Q53HV7 270 aa8.86□□□□□ -0.99
PTCH1-206ENST00000421141 ZNF324BQ6AW86 544 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms