RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SLC25A16P16260 332 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 PSMB3P49720 205 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 FGF8P55075 233 aaPredicted RBP13.4□□□□□ -0.26
SSBP3-205ENST00000417664 GNB1P62873 340 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 C5orf64Q2M2E5 130 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 ATRAIDQ6UW56 229 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 OR1L6Q8NGR2 347 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 C1RLQ9NZP8 487 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 IGHV4-30-2A0A087WSY4 118 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 ZFP92A6NM28 416 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 BTN1A1Q13410 526 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 SLC35E3Q7Z769 313 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 RXFP4Q8TDU9 374 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 SSMEM1Q8WWF3 244 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 PERPQ96FX8 193 aa13.4□□□□□ -0.26
SSBP3-205ENST00000417664 F11RQ9Y624 299 aaKnown RBP13.4□□□□□ -0.26
SSBP3-205ENST00000417664 WNK2Q9Y3S1 2297 aa13.4□□□□□ -0.27
SSBP3-205ENST00000417664 FCN1O00602 326 aa13.39□□□□□ -0.27
SSBP3-205ENST00000417664 NPFFO15130 113 aa13.39□□□□□ -0.27
SSBP3-205ENST00000417664 CNIH1O95406 144 aa13.39□□□□□ -0.27
SSBP3-205ENST00000417664 CRYGCP07315 174 aa13.39□□□□□ -0.27
SSBP3-205ENST00000417664 SAA4P35542 130 aa13.39□□□□□ -0.27
SSBP3-205ENST00000417664 RHOBP62745 196 aa13.39□□□□□ -0.27
SSBP3-205ENST00000417664 SSBP2P81877 361 aaPredicted RBP13.39□□□□□ -0.27
SSBP3-205ENST00000417664 DYNAPQ8N1N2 210 aa13.39□□□□□ -0.27
SSBP3-205ENST00000417664 CLRN3Q8NCR9 226 aa13.39□□□□□ -0.27
SSBP3-205ENST00000417664 NANPQ8TBE9 248 aa13.39□□□□□ -0.27
SSBP3-205ENST00000417664 C22orf15Q8WYQ4 148 aa13.39□□□□□ -0.27
SSBP3-205ENST00000417664 IGKV1OR2-108A0A075B7D4 117 aa13.38□□□□□ -0.27
SSBP3-205ENST00000417664 MT-CO2P00403 227 aa13.38□□□□□ -0.27
SSBP3-205ENST00000417664 LINC00869P0C866 280 aa13.38□□□□□ -0.27
SSBP3-205ENST00000417664 SELENOTP62341 195 aa13.38□□□□□ -0.27
SSBP3-205ENST00000417664 ZNF562Q6V9R5 426 aa13.38□□□□□ -0.27
SSBP3-205ENST00000417664 THAP8Q8NA92 274 aa13.38□□□□□ -0.27
SSBP3-205ENST00000417664 FNDC4Q9H6D8 234 aaPredicted RBP13.38□□□□□ -0.27
SSBP3-205ENST00000417664 CENPVL3A0A0U1RRI6 287 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 A1L4Q6 167 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 STAG3L2P0CL84 134 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 STAG3L3P0CL85 134 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 AREGP15514 252 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 TMEM11P17152 192 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 OR10J1P30954 320 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 GCSAMLQ5JQS6 135 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 SUN5Q8TC36 379 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 AJUBAQ96IF1 538 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 CXorf1O96002 111 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 REG1AP05451 166 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 GATA3P23771 443 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 FXYD3Q14802 87 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 MLANAQ16655 118 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 CYP2G1PQ6ZSU1 146 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 TMEM116Q8NCL8 245 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 OR2T6Q8NHC8 308 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 ACY3Q96HD9 319 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 RNF2Q99496 336 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 TXNDC17Q9BRA2 123 aa13.37□□□□□ -0.27
SSBP3-205ENST00000417664 MED13LQ71F56 2210 aa13.36□□□□□ -0.27
SSBP3-205ENST00000417664 B4DSR2 109 aa13.36□□□□□ -0.27
SSBP3-205ENST00000417664 PLXNB1O43157 2135 aa13.36□□□□□ -0.27
SSBP3-205ENST00000417664 MSMBP08118 114 aa13.36□□□□□ -0.27
SSBP3-205ENST00000417664 MEF2BQ02080 365 aaPredicted RBP13.36□□□□□ -0.27
SSBP3-205ENST00000417664 CLEC12BQ2HXU8 276 aa13.36□□□□□ -0.27
SSBP3-205ENST00000417664 CYB561D1Q8N8Q1 229 aa13.36□□□□□ -0.27
SSBP3-205ENST00000417664 C17orf50Q8WW18 174 aa13.36□□□□□ -0.27
SSBP3-205ENST00000417664 IGHV1-69DA0A0B4J2H0 117 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 TCRBV4S1A1TA0A5B7 111 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 NCBP2LA6PVI3 153 aaKnown RBP13.35□□□□□ -0.27
SSBP3-205ENST00000417664 TMEM250H0YL14 139 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 HMGB3O15347 200 aaKnown RBP13.35□□□□□ -0.27
SSBP3-205ENST00000417664 IGHV1-69P01742 117 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 CTRB1P17538 263 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 CD24P25063 80 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 NPBWR1P48145 328 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 CTRB2Q6GPI1 263 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 ABHD5Q8WTS1 349 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 GATAD1Q8WUU5 269 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 NPIPB3Q92617 1050 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 MISP3Q96FF7 219 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 FAM208BQ5VWN6 2430 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 NAV3Q8IVL0 2385 aa13.35□□□□□ -0.27
SSBP3-205ENST00000417664 DNASE2O00115 360 aaPredicted RBP13.34□□□□□ -0.27
SSBP3-205ENST00000417664 MFAP2P55001 183 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 RHEBQ15382 184 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 BEX4Q9NWD9 120 aaPredicted RBP13.34□□□□□ -0.27
SSBP3-205ENST00000417664 TACC2O95359 2948 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 TRAV20A0A0B4J274 112 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 FBP1P09467 338 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 OR5G3P0C626 314 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 PAX6P26367 422 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 RND2P52198 227 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 CX3CL1P78423 397 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 SPNS3Q6ZMD2 512 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 ARPC1AQ92747 370 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 PFDN5Q99471 154 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 TRGV9Q99603 122 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 NIPSNAP3BQ9BS92 247 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 SLC25A33Q9BSK2 321 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 MRPL32Q9BYC8 188 aaKnown RBP13.34□□□□□ -0.27
SSBP3-205ENST00000417664 WNT10AQ9GZT5 417 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms