RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 PVRIGQ6DKI7 326 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 TTC9CQ8N5M4 171 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 OR1P1Q8NH06 330 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 ZNF418Q8TF45 676 aaPredicted RBP7.59□□□□□ -1.19
RIF1-202ENST00000414861 ARPC5LQ9BPX5 153 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 NPFFR1Q9GZQ6 430 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 FNDC4Q9H6D8 234 aaPredicted RBP7.59□□□□□ -1.19
RIF1-202ENST00000414861 TRAV41A0A0B4J266 112 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 KANTRA0A1W2PQU2 76 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 TRIM77I1YAP6 450 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 IGHV3-48P01763 117 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 RAB11AP62491 216 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 SRSF2Q01130 221 aaKnown RBP7.59□□□□□ -1.19
RIF1-202ENST00000414861 LILRB2Q8N423 598 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 OR10P1Q8NGE3 313 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 OR1S2Q8NGQ3 325 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 MISP3Q96FF7 219 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 FANCD2OSQ96PS1 177 aa7.59□□□□□ -1.19
RIF1-202ENST00000414861 IGHV3-21A0A0B4J1V1 117 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 AP4M1O00189 453 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 DEFA4P12838 97 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 UBA52P62987 128 aaKnown RBP7.58□□□□□ -1.2
RIF1-202ENST00000414861 HBG1P69891 147 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 HBG2P69892 147 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 AKIRIN2Q53H80 203 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 ARSJQ5FYB0 599 aaPredicted RBP7.58□□□□□ -1.2
RIF1-202ENST00000414861 FAM110DQ8TAY7 271 aaPredicted RBP7.58□□□□□ -1.2
RIF1-202ENST00000414861 PINX1Q96BK5 328 aaKnown RBP7.58□□□□□ -1.2
RIF1-202ENST00000414861 ATP5SQ99766 215 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 ZNF471Q9BX82 626 aaPredicted RBP7.58□□□□□ -1.2
RIF1-202ENST00000414861 MRPL36Q9P0J6 103 aaKnown RBP7.58□□□□□ -1.2
RIF1-202ENST00000414861 IGLV11-55A0A075B6I3 123 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 UBE2L5PA0A1B0GUS4 154 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 RNASE1P07998 156 aaKnown RBP7.58□□□□□ -1.2
RIF1-202ENST00000414861 OPRK1P41145 380 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 SUB1P53999 127 aaKnown RBP eCLIP7.58□□□□□ -1.2
RIF1-202ENST00000414861 SLC25A24Q6NUK1 477 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 PRSS22Q9GZN4 317 aa7.58□□□□□ -1.2
RIF1-202ENST00000414861 PPIFP30405 207 aaKnown RBP7.57□□□□□ -1.2
RIF1-202ENST00000414861 ATP5IP56385 69 aaPredicted RBP7.57□□□□□ -1.2
RIF1-202ENST00000414861 CFHR3Q02985 330 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 C10orf99Q6UWK7 81 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 Q8N2B8 174 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 RFNGQ9Y644 331 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 K7EIM0 57 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 CFDP00746 253 aaPredicted RBP7.57□□□□□ -1.2
RIF1-202ENST00000414861 DLK1P80370 383 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 CD69Q07108 199 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 VWC2Q2TAL6 325 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 Q6ZSV7 163 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 SLC16A13Q7RTY0 426 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 RNASEH2CQ8TDP1 164 aaKnown RBP7.57□□□□□ -1.2
RIF1-202ENST00000414861 TMEM147Q9BVK8 224 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 S4R3C0 116 aa7.57□□□□□ -1.2
RIF1-202ENST00000414861 SMCO3A2RU48 225 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 I3L2K1 104 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 TAAR5O14804 337 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 MT-CO2P00403 227 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 RUNX1Q01196 453 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 ZNF329Q86UD4 541 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 SLC51BQ86UW2 128 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 OR2T6Q8NHC8 308 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 TMEM68Q96MH6 324 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 SERTAD4Q9NUC0 356 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 UQCC1Q9NVA1 299 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 IGKV1OR2-108A0A075B7D4 117 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 MFSD2BA6NFX1 497 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 OR2J3O76001 311 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 DFFBO76075 338 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 IFITM2Q01629 132 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 GAMTQ14353 236 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 TREML4Q6UXN2 200 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 LCNL1Q6ZST4 164 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 HSD17B11Q8NBQ5 300 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 STOML3Q8TAV4 291 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 ST8SIA2Q92186 375 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 MS4A10Q96PG2 267 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 ZNF355PQ9NSJ1 428 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 ZNF580Q9UK33 172 aa7.56□□□□□ -1.2
RIF1-202ENST00000414861 TRBV9A0A0B4J1U6 114 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 NDUFB8O95169 186 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 ZNF266Q14584 549 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 UBAC2Q8NBM4 344 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 GGACTQ9BVM4 153 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 SH3BGRL3Q9H299 93 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 KLK15Q9H2R5 256 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 CORTO00230 105 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 TCF21O43680 179 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 JTBO76095 146 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 SCAF4O95104 1147 aaKnown RBP7.55□□□□□ -1.2
RIF1-202ENST00000414861 C4BPBP20851 252 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 MDKP21741 143 aaPredicted RBP7.55□□□□□ -1.2
RIF1-202ENST00000414861 RND2P52198 227 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 RHOGP84095 191 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 AKR1C1Q04828 323 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 EXOSC2Q13868 293 aaKnown RBP7.55□□□□□ -1.2
RIF1-202ENST00000414861 KLK9Q2XQG4 91 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 ACY3Q96HD9 319 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 RSG1Q9BU20 258 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 WDR61Q9GZS3 305 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms