RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 RPS23P62266 143 aaKnown RBP2.82□□□□□ -1.96
SF3B1-203ENST00000414174 FOXF1Q12946 379 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 ERCC8Q13216 396 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 ZNF345Q14585 488 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 ELOBQ15370 118 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 ZNF79Q15937 498 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 NSUN5P1Q3KNT7 163 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 SP6Q3SY56 376 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 C1orf140Q5VVS0 124 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 KTN1-AS1Q86SY8 53 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 TRAPPC6BQ86SZ2 158 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 WDR86Q86TI4 376 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 SLC22A24Q8N4F4 322 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 ZIC4Q8N9L1 334 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 OR10G8Q8NGN5 311 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 SCGB1C1Q8TD33 95 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 MS4A6EQ96DS6 147 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 S100A16Q96FQ6 103 aaKnown RBP2.82□□□□□ -1.96
SF3B1-203ENST00000414174 ZC2HC1AQ96GY0 325 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 OR2A5Q96R48 311 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 EIF5A2Q9GZV4 153 aaKnown RBP2.82□□□□□ -1.96
SF3B1-203ENST00000414174 BCL2L10Q9HD36 194 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 NDUFB11Q9NX14 153 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 VSIG4Q9Y279 399 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 EFCAB5A4FU69 1503 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 SAMD9Q5K651 1589 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 DIP2BQ9P265 1576 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 DIP2CQ9Y2E4 1556 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 PIK3C2BO00750 1634 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 KIF13BQ9NQT8 1826 aa2.82□□□□□ -1.96
SF3B1-203ENST00000414174 OTOFQ9HC10 1997 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 TRBV20-1A0A075B6N2 111 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 IGHV1OR21-1A0A087WYE8 117 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 TRAV8-1A0A0A6YYK1 113 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 TRAV13-1A0A0B4J241 112 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 CCL15-CCL14A0A0B4J2E2 113 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 IGHV1-58A0A0C4DH39 117 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 MUC21A0A0G2JKD1 596 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 DNAJC9-AS1A6NH13 148 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 LINC00473A8K010 186 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 A8MWV9 139 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 SNURFLB1AK76 121 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 KLLNB2CW77 178 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 H3BP45 60 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 APOC4-APOC2K7ER74 178 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 TIMM23O14925 209 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 NDUFB2O95178 105 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 APOC2P02655 101 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 RBMY1CP0DJD4 496 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 GATA2P23769 480 aaPredicted RBP2.81□□□□□ -1.96
SF3B1-203ENST00000414174 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 HLA-DMBP28068 263 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 INSL3P51460 131 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 P2RX1P51575 399 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 CACNG7P62955 275 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 ELOCQ15369 112 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 SPATA45Q537H7 98 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 UBE2NLQ5JXB2 153 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 HES3Q5TGS1 186 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 SLC25A34Q6PIV7 304 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 ATP5L2Q7Z4Y8 100 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 SLC25A42Q86VD7 318 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 OR2T10Q8NGZ9 312 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 OR9G1Q8NH87 305 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 COPS9Q8WXC6 57 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 RNF185Q96GF1 192 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 C2orf50Q96LR7 162 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 CALYQ9NYX4 217 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 CTSZQ9UBR2 303 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 OR2W1Q9Y3N9 320 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 HES2Q9Y543 173 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 DSPPQ9NZW4 1301 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 EFCAB6Q5THR3 1501 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 RBBP6Q7Z6E9 1792 aaKnown RBP2.81□□□□□ -1.96
SF3B1-203ENST00000414174 ADAMTSL1Q8N6G6 1762 aa2.81□□□□□ -1.96
SF3B1-203ENST00000414174 DOCK3Q8IZD9 2030 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 MYH9P35579 1960 aaKnown RBP2.8□□□□□ -1.96
SF3B1-203ENST00000414174 MYH6P13533 1939 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 BAZ2AQ9UIF9 1905 aaKnown RBP2.8□□□□□ -1.96
SF3B1-203ENST00000414174 NUP210LQ5VU65 1888 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 TIAM1Q13009 1591 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 ARHGEF12Q9NZN5 1544 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 ADGRL1O94910 1474 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 RALGAPBQ86X10 1494 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 CRB1P82279 1406 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 TRAV8-3A0A0A6YYJ7 113 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 IGKV1D-13A0A0B4J2D9 117 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 A0A0J9YW62 118 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 A0A1W2PPM0 123 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 IRGMA1A4Y4 181 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 OOSP1A8MZH6 123 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 H0YIZ8 118 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 H3BMG7 143 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 LGALS9O00182 355 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 XKRYO14609 159 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 PROP1O75360 226 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 CDK2AP2O75956 126 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 SNCGO76070 127 aa2.8□□□□□ -1.96
SF3B1-203ENST00000414174 TRACP01848 142 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms