RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 YAE1D1Q9NRH1 226 aa5.25□□□□□ -1.57
VPS41-204ENST00000413141 TMEM160Q9NX00 188 aa5.25□□□□□ -1.57
VPS41-204ENST00000413141 VPREB3Q9UKI3 123 aa5.25□□□□□ -1.57
VPS41-204ENST00000413141 WDR83OSQ9Y284 106 aa5.25□□□□□ -1.57
VPS41-204ENST00000413141 DMRT1Q9Y5R6 373 aa5.25□□□□□ -1.57
VPS41-204ENST00000413141 MYO9AB2RTY4 2548 aa5.25□□□□□ -1.57
VPS41-204ENST00000413141 ABCA1O95477 2261 aa5.25□□□□□ -1.57
VPS41-204ENST00000413141 SMCO3A2RU48 225 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 CORTO00230 105 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 HOXA3O43365 443 aaPredicted RBP5.24□□□□□ -1.57
VPS41-204ENST00000413141 CRYGCP07315 174 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 FGF7P21781 194 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 SRP14P37108 136 aaKnown RBP5.24□□□□□ -1.57
VPS41-204ENST00000413141 OPRK1P41145 380 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 CRIP2P52943 208 aaPredicted RBP5.24□□□□□ -1.57
VPS41-204ENST00000413141 AKR1C1Q04828 323 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 CD69Q07108 199 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 ECSCRQ19T08 205 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 CLLU1Q5K131 121 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 BTNL8Q6UX41 500 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 TREML4Q6UXN2 200 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 TTC9CQ8N5M4 171 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 SIGLECL1Q8N7X8 197 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 LFNGQ8NES3 379 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 SCGB1C1Q8TD33 95 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 TAF15Q92804 592 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS41-204ENST00000413141 MISP3Q96FF7 219 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 SLC35E1Q96K37 410 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 SMR3AQ99954 134 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 PSMG3Q9BT73 122 aaPredicted RBP5.24□□□□□ -1.57
VPS41-204ENST00000413141 RSG1Q9BU20 258 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 NPCDR1Q9BY65 106 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 FNDC4Q9H6D8 234 aaPredicted RBP5.24□□□□□ -1.57
VPS41-204ENST00000413141 LSM4Q9Y4Z0 139 aaKnown RBP5.24□□□□□ -1.57
VPS41-204ENST00000413141 TIMM9Q9Y5J7 89 aa5.24□□□□□ -1.57
VPS41-204ENST00000413141 TEX15Q9BXT5 2789 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 IGLV11-55A0A075B6I3 123 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 LINC01548A6NM66 108 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 MPDU1O75352 247 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 IGHG2P01859 326 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 PRH1P02810 166 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 NMBP08949 121 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 FAM157CP0CG43 387 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 DEFA4P12838 97 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 GPX4P36969 197 aaPredicted RBP5.23□□□□□ -1.57
VPS41-204ENST00000413141 SULT1A2P50226 295 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 GAMTQ14353 236 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 C19orf54Q5BKX5 351 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 TEPPQ6URK8 271 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 UNQ5815/PRO19632Q6UWF5 114 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 TMEM182Q6ZP80 229 aaPredicted RBP5.23□□□□□ -1.57
VPS41-204ENST00000413141 SLC35E3Q7Z769 313 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 TMEM86BQ8N661 226 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 OR1L6Q8NGR2 347 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 OR2G3Q8NGZ4 309 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 FAM110DQ8TAY7 271 aaPredicted RBP5.23□□□□□ -1.57
VPS41-204ENST00000413141 RNF141Q8WVD5 230 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 PCNPQ8WW12 178 aaKnown RBP5.23□□□□□ -1.57
VPS41-204ENST00000413141 CACNG8Q8WXS5 425 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 TMEM68Q96MH6 324 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 MGST2Q99735 147 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 WNT10AQ9GZT5 417 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 NPVFQ9HCQ7 196 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 TNFRSF19Q9NS68 423 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 RFNGQ9Y644 331 aa5.23□□□□□ -1.57
VPS41-204ENST00000413141 NOTCH2Q04721 2471 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 CSPG4Q6UVK1 2322 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 IGKV1OR2-108A0A075B7D4 117 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 TRAV41A0A0B4J266 112 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 ZNF705EA8MWA4 302 aaPredicted RBP5.22□□□□□ -1.57
VPS41-204ENST00000413141 UMAD1C9J7I0 102 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 C17orf112F2Z3M2 114 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 G3V318 75 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 I3L2K1 104 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 K7EIM0 57 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 PLXNB1O43157 2135 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 TSPAN9O75954 239 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 LY6G6DO95868 133 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 MT-CO2P00403 227 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 IGF1P05019 195 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 RND2P52198 227 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 ELLP55199 621 aaPredicted RBP5.22□□□□□ -1.57
VPS41-204ENST00000413141 RAB14P61106 215 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 BLCAPP62952 87 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 SCGB2A2Q13296 93 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 MLANAQ16655 118 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 KLK9Q2XQG4 91 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 AKIRIN2Q53H80 203 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 C9orf152Q5JTZ5 239 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 ETFRF1Q6IPR1 90 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 ACSM6Q6P461 480 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 TMEM144Q7Z5S9 345 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 CENPVQ7Z7K6 275 aaPredicted RBP5.22□□□□□ -1.57
VPS41-204ENST00000413141 OR2T6Q8NHC8 308 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 LRRC20Q8TCA0 184 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 ACY3Q96HD9 319 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 CXorf58Q96LI9 332 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 FANCD2OSQ96PS1 177 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 GGTLC1Q9BX51 225 aa5.22□□□□□ -1.57
VPS41-204ENST00000413141 KCNIP2Q9NS61 270 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms