RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 OR4A47Q6IF82 309 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 C18orf32Q8TCD1 76 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 C22orf15Q8WYQ4 148 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 SNRNP40Q96DI7 357 aaKnown RBP7.86□□□□□ -1.15
SMC1B-202ENST00000404354 ZNF503Q96F45 646 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 BET1LQ9NYM9 111 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 PILRBQ9UKJ0 227 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 WASHC3Q9Y3C0 194 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 WNK2Q9Y3S1 2297 aa7.86□□□□□ -1.15
SMC1B-202ENST00000404354 TRGV10A0A0A0MS01 117 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 CSN3P07498 182 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 REG1BP48304 166 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 RBX1P62877 108 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 TCTEX1D1Q8N7M0 179 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 CA7P43166 264 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 SSBP2P81877 361 aaPredicted RBP7.85□□□□□ -1.15
SMC1B-202ENST00000404354 SSPNQ14714 243 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 TCF24Q7RTU0 167 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 ZNF738Q8NE65 137 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 VPS25Q9BRG1 176 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 PCSK5Q92824 1860 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 CACNA1HO95180 2353 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 MPDU1O75352 247 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 IGKV1-16P04430 117 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 SELENOVP59797 346 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 UBE2L3P68036 154 aaKnown RBP7.85□□□□□ -1.15
SMC1B-202ENST00000404354 SPACA3Q8IXA5 215 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 NEUROG1Q92886 237 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 TRIB1Q96RU8 372 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 SPRR3Q9UBC9 169 aa7.85□□□□□ -1.15
SMC1B-202ENST00000404354 LSM4Q9Y4Z0 139 aaKnown RBP7.85□□□□□ -1.15
SMC1B-202ENST00000404354 LOC105371242A0A075B767 164 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 PRSS46E5RG02 174 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 J3QR06 171 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 AMY1AP04745 511 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 LINC00869P0C866 280 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 C15orf65H3BRN8 121 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 SPRY3O43610 288 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 NUDT3O95989 172 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 ESDP10768 282 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 KLHDC1Q8N7A1 406 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 NAA38Q9BRA0 125 aaKnown RBP7.84□□□□□ -1.15
SMC1B-202ENST00000404354 KLF13Q9Y2Y9 288 aaPredicted RBP7.84□□□□□ -1.15
SMC1B-202ENST00000404354 NBASA2RRP1 2371 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 PIEZO2Q9H5I5 2752 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.84□□□□□ -1.15
SMC1B-202ENST00000404354 NKX6-3A6NJ46 265 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 UBE2V1Q13404 147 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 SMIM21Q3B7S5 101 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 FBLN7Q53RD9 439 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 LDLRAD2Q5SZI1 272 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 ZNF596Q8TC21 504 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 OR51B2Q9Y5P1 312 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 COX11Q9Y6N1 276 aa7.84□□□□□ -1.15
SMC1B-202ENST00000404354 SAA2-SAA4A0A096LPE2 208 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 NTN3O00634 580 aaPredicted RBP7.83□□□□□ -1.16
SMC1B-202ENST00000404354 SAA2P0DJI9 122 aaPredicted RBP7.83□□□□□ -1.16
SMC1B-202ENST00000404354 WDR73Q6P4I2 378 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 VWA1Q6PCB0 445 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 IGKV1D-17A0A075B6S4 117 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 FAM181BA6NEQ2 426 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 OR2T8A6NH00 312 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 HIGD1CA8MV81 97 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 ISLRO14498 428 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 IGLV2-8P01709 118 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 REG1AP05451 166 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 SP1P08047 785 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 HOXC12P31275 282 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 PRB3Q04118 309 aaPredicted RBP7.83□□□□□ -1.16
SMC1B-202ENST00000404354 CT45A1Q5HYN5 189 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 C10orf55Q5SWW7 151 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 PMS2CLQ68D20 193 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 MOGAT3Q86VF5 341 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 NUP35Q8NFH5 326 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 OR5B3Q8NH48 314 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 CT45A3Q8NHU0 189 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 IFI27L2Q9H2X8 130 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 ABI3Q9P2A4 366 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 C9JCJ5 164 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 MMP23AO75900 390 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 PSG1P11464 419 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 AREGP15514 252 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 HSPE1P61604 102 aaKnown RBP7.83□□□□□ -1.16
SMC1B-202ENST00000404354 SSX8Q7RTT4 187 aa7.83□□□□□ -1.16
SMC1B-202ENST00000404354 TRGV5A0A0B4J1U4 118 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 LNP1A1A4G5 178 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 SRRM4A7MD48 611 aaKnown RBP7.82□□□□□ -1.16
SMC1B-202ENST00000404354 HLA-DQA1P01909 254 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 RPL19P84098 196 aaKnown RBP7.82□□□□□ -1.16
SMC1B-202ENST00000404354 CXXC4Q9H2H0 198 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 AMMECR1Q9Y4X0 333 aaPredicted RBP7.82□□□□□ -1.16
SMC1B-202ENST00000404354 DSCAMO60469 2012 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 IQCF6A8MYZ5 107 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 OR10J3Q5JRS4 329 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 C19orf35Q6ZS72 473 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 NUDT10Q8NFP7 164 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 NUDT11Q96G61 164 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 TNFRSF19Q9NS68 423 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 OR4C46A6NHA9 309 aa7.82□□□□□ -1.16
SMC1B-202ENST00000404354 C15orf61A6NNL5 157 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms