RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 KIAA1644Q3SXP7 199 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 SSBP4Q9BWG4 385 aaPredicted RBP6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 IGHV3OR16-12A0A075B7B8 117 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 IFI27P40305 119 aaPredicted RBP6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 SRSF8Q9BRL6 282 aaKnown RBP6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 FOXL2P58012 376 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 LY6G6FQ5SQ64 297 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 Q6ZS49 121 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 SPCS1Q9Y6A9 102 aa6.99□□□□□ -1.29
SPTLC3-201ENST00000399002 HIGD1CA8MV81 97 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 SEC11AP67812 179 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 DTX2Q86UW9 622 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 TMEM167AQ8TBQ9 72 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 OVOL2Q9BRP0 275 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 NDUFAF3Q9BU61 184 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 LINC00587B1AMM8 73 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 CSRP1P21291 193 aaKnown RBP6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 RNF125Q96EQ8 232 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 NPFFR1Q9GZQ6 430 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 SCN10AQ9Y5Y9 1956 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 SLC17A3O00476 420 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 OTX1P32242 354 aaPredicted RBP6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 FOXL1Q12952 345 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 NRN1Q9NPD7 142 aa6.98□□□□□ -1.29
SPTLC3-201ENST00000399002 LOC102724200A0A096LPH7 203 aaPredicted RBP6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 TMEM50AO95807 157 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 IGKV3-15P01624 115 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 MINOS1Q5TGZ0 78 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 MINOS1-NBL1R4GNA1 71 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 TRBV24-1A0A075B6N3 115 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 RAMP1O60894 148 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 LYL1P12980 280 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 ERVK11-1P61568 191 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 HSD52Q0P140 79 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 FAM216BQ8N7L0 139 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 OR9G4Q8NGQ1 327 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 GPHA2Q96T91 129 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 PRSS22Q9GZN4 317 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 WDR83OSQ9Y284 106 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 IGKCP01834 107 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 THBDP07204 575 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 DUTP33316 252 aaKnown RBP6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 CLEC19AQ6UXS0 136 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 OR13C6PQ8NH95 151 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 CYSLTR1Q9Y271 337 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 CHTOPQ9Y3Y2 248 aaKnown RBP6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 CFPP27918 469 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 ZFP36L1Q07352 338 aaKnown RBP6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 HEPN1Q6WQI6 88 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 SPRED2Q7Z698 418 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 TRGV9Q99603 122 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 KLK15Q9H2R5 256 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 TRAV8-6A0A0B4J262 113 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 LINC00614P0C842 121 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 RHOGP84095 191 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 C9orf106Q8NAJ2 232 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 SLC25A39Q9BZJ4 359 aaPredicted RBP6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 LAMTOR2Q9Y2Q5 125 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 NEUROG3Q9Y4Z2 214 aa6.97□□□□□ -1.29
SPTLC3-201ENST00000399002 M0R381 172 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 GFRA3O60609 400 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 CELA3AP09093 270 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 TIMP3P35625 211 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 COLCA1Q6ZS62 124 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 LHFPL1Q86WI0 220 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 LYPD1Q8N2G4 141 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 FAM169BQ8N8A8 192 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 OR2K2Q8NGT1 345 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 LINC01560Q8TB33 94 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 LINC01587Q99440 93 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 PSG8Q9UQ74 426 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 NYNRINQ9P2P1 1898 aaKnown RBP6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 A0A0G2JMM0 328 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 A0A1W2PPB8 328 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 A0A1W2PRS3 328 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 KIR3DP1A8MWS1 328 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 SLC25A20O43772 301 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 SERF1AO75920 110 aa6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 SLC25A48Q6ZT89 311 aaKnown RBP6.96□□□□□ -1.29
SPTLC3-201ENST00000399002 IGHV1-18A0A0C4DH31 117 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 A0A1B0GWB2 263 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 E9PLN8 166 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 LDLRAD4O15165 306 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 OR9G9P0C7N8 305 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 ATOH7Q8N100 152 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 RNF182Q8N6D2 247 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 VKORC1Q9BQB6 163 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 A0A0A6YYD4 124 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 PROB1E7EW31 1015 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 NTN3O00634 580 aaPredicted RBP6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 TMEM42Q69YG0 159 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 LTBP1Q14766 1721 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 H3BTX0 84 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 EFNB3Q15768 340 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 ATP1A1-AS1Q5TC04 95 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 SPSB3Q6PJ21 355 aa6.96□□□□□ -1.3
SPTLC3-201ENST00000399002 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 M0R1W7 72 aa6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 HOXA3O43365 443 aaPredicted RBP6.95□□□□□ -1.3
SPTLC3-201ENST00000399002 FAM27E3Q08E93 113 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms