RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 CLEC3BP05452 202 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 GP9P14770 177 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 AKR1C4P17516 323 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 SUPT4H1P63272 117 aaKnown RBP6.51□□□□□ -1.37
APLF-202ENST00000394342 SRPXP78539 464 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 FAM106AQ4KMX7 169 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 DEFB121Q5J5C9 76 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 SPSB3Q6PJ21 355 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 OR2K2Q8NGT1 345 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 OR52E5Q8NH55 327 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 BSCL2Q96G97 398 aaPredicted RBP6.51□□□□□ -1.37
APLF-202ENST00000394342 SDHCQ99643 169 aaPredicted RBP6.51□□□□□ -1.37
APLF-202ENST00000394342 ENY2Q9NPA8 101 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.51□□□□□ -1.37
APLF-202ENST00000394342 GAR1Q9NY12 217 aaKnown RBP6.51□□□□□ -1.37
APLF-202ENST00000394342 C21orf62Q9NYP8 219 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 CACFD1Q9UGQ2 172 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 LSM4Q9Y4Z0 139 aaKnown RBP6.51□□□□□ -1.37
APLF-202ENST00000394342 TENM3Q9P273 2699 aa6.51□□□□□ -1.37
APLF-202ENST00000394342 A0A0B4J2A0 478 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 DUXBA0A1W2PPF3 345 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 C2orf70A6NJV1 201 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 A8MWP6 167 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 HLA-AP01891 365 aaKnown RBP6.5□□□□□ -1.37
APLF-202ENST00000394342 FCGR2BP31994 310 aaPredicted RBP6.5□□□□□ -1.37
APLF-202ENST00000394342 GPR183P32249 361 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 SNCAP37840 140 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 HOXA1P49639 335 aaPredicted RBP6.5□□□□□ -1.37
APLF-202ENST00000394342 SUB1P53999 127 aaKnown RBP eCLIP6.5□□□□□ -1.37
APLF-202ENST00000394342 SPCS3P61009 180 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 UBE2MP61081 183 aaKnown RBP6.5□□□□□ -1.37
APLF-202ENST00000394342 RBMS2Q15434 407 aaKnown RBP6.5□□□□□ -1.37
APLF-202ENST00000394342 BAK1Q16611 211 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 TMEM128Q5BJH2 165 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 SPINK9Q5DT21 86 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 PLET1Q6UQ28 207 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 Q6ZRM9 215 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 LINC00299Q6ZSB3 139 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 TMED4Q7Z7H5 227 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 LGI3Q8N145 548 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 SCARB1Q8WTV0 552 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 GPR146Q96CH1 333 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 MISP3Q96FF7 219 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 TXN2Q99757 166 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 B9D2Q9BPU9 175 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 C7orf50Q9BRJ6 194 aaKnown RBP6.5□□□□□ -1.37
APLF-202ENST00000394342 ZNF436Q9C0F3 470 aaPredicted RBP6.5□□□□□ -1.37
APLF-202ENST00000394342 PALMDQ9NP74 551 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 CACNG5Q9UF02 275 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 SHPKQ9UHJ6 478 aa6.5□□□□□ -1.37
APLF-202ENST00000394342 IGHV3-21A0A0B4J1V1 117 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 OR2T8A6NH00 312 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 CENPXA8MT69 81 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 F8W735 103 aaPredicted RBP6.49□□□□□ -1.37
APLF-202ENST00000394342 I3L2K1 104 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 CORTO00230 105 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 SULT1A3P0DMM9 295 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 SULT1A4P0DMN0 295 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 RNASE2P10153 161 aaKnown RBP6.49□□□□□ -1.37
APLF-202ENST00000394342 IL7P13232 177 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 CCR6P51684 374 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 MFAP4P55083 255 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 ELLP55199 621 aaPredicted RBP6.49□□□□□ -1.37
APLF-202ENST00000394342 NMSQ5H8A3 153 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 PVRIGQ6DKI7 326 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 LCN12Q6JVE5 192 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 HAPLN4Q86UW8 402 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 CENPSQ8N2Z9 138 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 LRTM2Q8N967 370 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 DYNLRB2Q8TF09 96 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 WDR89Q96FK6 387 aaPredicted RBP6.49□□□□□ -1.37
APLF-202ENST00000394342 TECRQ9NZ01 308 aaKnown RBP6.49□□□□□ -1.37
APLF-202ENST00000394342 PRR13Q9NZ81 148 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 SMAD5-AS1Q9Y6J3 95 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 AGRNO00468 2067 aa6.49□□□□□ -1.37
APLF-202ENST00000394342 ZNF320A2RRD8 509 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 TMEM213A2RRL7 107 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 NDUFA4O00483 81 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 NDUFB6O95139 128 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 SFT2D2O95562 160 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 MT-CO2P00403 227 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 FOLR2P14207 255 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 HTR2BP41595 481 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 CD69Q07108 199 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 SMCO1Q147U7 214 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 DEFB114Q30KQ6 69 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 CNPY1Q3B7I2 92 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 BSXQ3C1V8 233 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 Q56UQ5 140 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 ADAMTSL5Q6ZMM2 481 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 LYZL2Q7Z4W2 148 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 UBAC2Q8NBM4 344 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 TMEM190Q8WZ59 177 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 MARC2Q969Z3 335 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 ZC4H2Q9NQZ6 224 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 UFC1Q9Y3C8 167 aa6.48□□□□□ -1.37
APLF-202ENST00000394342 A0A1B0GU03 582 aa6.47□□□□□ -1.37
APLF-202ENST00000394342 IZUMO1RA6ND01 250 aa6.47□□□□□ -1.37
APLF-202ENST00000394342 CEBPZOSA8MTT3 80 aa6.47□□□□□ -1.37
APLF-202ENST00000394342 NUPL2O15504 423 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms