RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 IL1F10Q8WWZ1 152 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 RLN3Q8WXF3 142 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 H1FXQ92522 213 aaKnown RBP2.81□□□□□ -1.96
TRAV39-201ENST00000390466 DPF1Q92782 380 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 CORO2AQ92828 525 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 SMIM12Q96EX1 92 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 NUDT11Q96G61 164 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 ZC2HC1AQ96GY0 325 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 C18orf15Q96N68 181 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 HSD17B10Q99714 261 aaKnown RBP2.81□□□□□ -1.96
TRAV39-201ENST00000390466 DEFB126Q9BYW3 111 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 PRSS22Q9GZN4 317 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 MEGF9Q9H1U4 602 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 WDR54Q9H977 334 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 SAP30LQ9HAJ7 183 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 TUBG2Q9NRH3 451 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 IDI2-AS1Q9NZ38 188 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 RNF24Q9Y225 148 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 FOXA2Q9Y261 457 aaPredicted RBP2.81□□□□□ -1.96
TRAV39-201ENST00000390466 ARHGAP32A7KAX9 2087 aa2.81□□□□□ -1.96
TRAV39-201ENST00000390466 CFAP54Q96N23 3096 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 ZDBF2Q9HCK1 2354 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 A0A087X0K7 114 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 IGHV5-10-1A0A0J9YXX1 117 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 A0A1W2PPV4 95 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 GAGE12BA1L429 117 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 C5orf49A4QMS7 147 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 TMEM189A5PLL7 270 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 C19orf71A6NCJ1 209 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 HELTA6NFD8 242 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 OOEPA6NGQ2 149 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 GJE1A6NN92 205 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 IQCF6A8MYZ5 107 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 NPIPB6E9PJ23 425 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 J3QW42 95 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 K7EP34 96 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 OR7C2O60412 319 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 CIDEAO60543 219 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 SPINK4O60575 86 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 HSBP1O75506 76 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 SCRG1O75711 98 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 NUDT3O95989 172 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 HAND1O96004 215 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 TFF1P04155 84 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 HOXB4P17483 251 aaPredicted RBP2.8□□□□□ -1.96
TRAV39-201ENST00000390466 NTF3P20783 257 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 USF1P22415 310 aaPredicted RBP2.8□□□□□ -1.96
TRAV39-201ENST00000390466 GABRA2P47869 451 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 ARL4DP49703 201 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 GNG4P50150 75 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 SSR4P51571 173 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 RIPPLY3P57055 190 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 LOXL3P58215 753 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 HTD2P86397 168 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 PAX2Q02962 417 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 PAX8Q06710 450 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 OR1C1Q15619 314 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 VAMP3Q15836 100 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 GABRA6Q16445 453 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 SMIM21Q3B7S5 101 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 CT83Q5H943 113 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 IBA57Q5T440 356 aaKnown RBP2.8□□□□□ -1.96
TRAV39-201ENST00000390466 SLC25A34Q6PIV7 304 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 PET117Q6UWS5 81 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 Q71RC1 249 aaPredicted RBP2.8□□□□□ -1.96
TRAV39-201ENST00000390466 H2BFWTQ7Z2G1 175 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 MOB3BQ86TA1 216 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 RPS19BP1Q86WX3 136 aaKnown RBP2.8□□□□□ -1.96
TRAV39-201ENST00000390466 Q8IYB0 196 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 ABHD12Q8N2K0 398 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 SPEM1Q8N4L4 309 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 DEFB119Q8N690 84 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 PRSS33Q8NF86 280 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 OR13A1Q8NGR1 328 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 OR4S2Q8NH73 311 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 CT55Q8WUE5 264 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 PHLDA1Q8WV24 401 aaPredicted RBP2.8□□□□□ -1.96
TRAV39-201ENST00000390466 GTSF1Q8WW33 167 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 ITLN1Q8WWA0 313 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 BCL2L2Q92843 193 aaPredicted RBP2.8□□□□□ -1.96
TRAV39-201ENST00000390466 NINJ1Q92982 152 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 CHCHD1Q96BP2 118 aaKnown RBP2.8□□□□□ -1.96
TRAV39-201ENST00000390466 SNRNP40Q96DI7 357 aaKnown RBP2.8□□□□□ -1.96
TRAV39-201ENST00000390466 GRAMD2BQ96HH9 432 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 OR2V2Q96R30 315 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 NABP2Q9BQ15 211 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 DCTN5Q9BTE1 182 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 TMEM70Q9BUB7 260 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 MLST8Q9BVC4 326 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 SSBP3Q9BWW4 388 aaPredicted RBP2.8□□□□□ -1.96
TRAV39-201ENST00000390466 SLC25A2Q9BXI2 301 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 MS4A6AQ9H2W1 248 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 IFI27L2Q9H2X8 130 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 NPVFQ9HCQ7 196 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 TMEM167BQ9NRX6 74 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 TMEM14BQ9NUH8 114 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 ZNF492Q9P255 531 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 IL19Q9UHD0 177 aa2.8□□□□□ -1.96
TRAV39-201ENST00000390466 KLF13Q9Y2Y9 288 aaPredicted RBP2.8□□□□□ -1.96
TRAV39-201ENST00000390466 LOXL2Q9Y4K0 774 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms