RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 GBGT1Q8N5D6 347 aa13.78□□□□□ -0.2
TMEM41A-202ENST00000382227 PINX1Q96BK5 328 aaKnown RBP13.78□□□□□ -0.2
TMEM41A-202ENST00000382227 RARRES2Q99969 163 aa13.78□□□□□ -0.2
TMEM41A-202ENST00000382227 SCPEP1Q9HB40 452 aa13.78□□□□□ -0.2
TMEM41A-202ENST00000382227 SMIM31A0A1B0GVY4 71 aa13.77□□□□□ -0.21
TMEM41A-202ENST00000382227 CD5P06127 495 aa13.77□□□□□ -0.21
TMEM41A-202ENST00000382227 RCVRNP35243 200 aa13.77□□□□□ -0.21
TMEM41A-202ENST00000382227 PAFAH1B2P68402 229 aa13.77□□□□□ -0.21
TMEM41A-202ENST00000382227 ERHP84090 104 aaKnown RBP13.77□□□□□ -0.21
TMEM41A-202ENST00000382227 RPP25LQ8N5L8 163 aaKnown RBP13.77□□□□□ -0.21
TMEM41A-202ENST00000382227 GINS3Q9BRX5 216 aa13.77□□□□□ -0.21
TMEM41A-202ENST00000382227 COMMD3Q9UBI1 195 aa13.77□□□□□ -0.21
TMEM41A-202ENST00000382227 APOA1P02647 267 aa13.76□□□□□ -0.21
TMEM41A-202ENST00000382227 TCF24Q7RTU0 167 aa13.76□□□□□ -0.21
TMEM41A-202ENST00000382227 SNX29P2Q8IUI4 249 aa13.76□□□□□ -0.21
TMEM41A-202ENST00000382227 VCX3AQ9NNX9 186 aa13.76□□□□□ -0.21
TMEM41A-202ENST00000382227 NPBWR1P48145 328 aa13.75□□□□□ -0.21
TMEM41A-202ENST00000382227 TOMM20LQ6UXN7 152 aa13.75□□□□□ -0.21
TMEM41A-202ENST00000382227 OR11H2Q8NH07 326 aa13.75□□□□□ -0.21
TMEM41A-202ENST00000382227 ST8SIA2Q92186 375 aa13.75□□□□□ -0.21
TMEM41A-202ENST00000382227 C11orf68Q9H3H3 251 aaKnown RBP13.75□□□□□ -0.21
TMEM41A-202ENST00000382227 VSIRQ9H7M9 311 aa13.75□□□□□ -0.21
TMEM41A-202ENST00000382227 A0A087WXM4 84 aa13.74□□□□□ -0.21
TMEM41A-202ENST00000382227 IZUMO4Q1ZYL8 232 aa13.74□□□□□ -0.21
TMEM41A-202ENST00000382227 SPINK9Q5DT21 86 aa13.74□□□□□ -0.21
TMEM41A-202ENST00000382227 LGALS9CQ6DKI2 356 aa13.74□□□□□ -0.21
TMEM41A-202ENST00000382227 DUSP18Q8NEJ0 188 aa13.74□□□□□ -0.21
TMEM41A-202ENST00000382227 C11orf45Q8TAV5 145 aa13.74□□□□□ -0.21
TMEM41A-202ENST00000382227 MFFQ9GZY8 342 aa13.74□□□□□ -0.21
TMEM41A-202ENST00000382227 M0QYG6 137 aa13.73□□□□□ -0.21
TMEM41A-202ENST00000382227 ST8SIA3O43173 380 aa13.73□□□□□ -0.21
TMEM41A-202ENST00000382227 APOHP02749 345 aaPredicted RBP13.73□□□□□ -0.21
TMEM41A-202ENST00000382227 SNCAP37840 140 aa13.73□□□□□ -0.21
TMEM41A-202ENST00000382227 NANOS2P60321 138 aaKnown RBP13.73□□□□□ -0.21
TMEM41A-202ENST00000382227 ZNF600Q6ZNG1 722 aa13.73□□□□□ -0.21
TMEM41A-202ENST00000382227 LILRB2Q8N423 598 aa13.73□□□□□ -0.21
TMEM41A-202ENST00000382227 MS4A6AQ9H2W1 248 aa13.73□□□□□ -0.21
TMEM41A-202ENST00000382227 ZFAND3Q9H8U3 227 aa13.73□□□□□ -0.21
TMEM41A-202ENST00000382227 PUS1Q9Y606 427 aaKnown RBP eCLIP13.73□□□□□ -0.21
TMEM41A-202ENST00000382227 INS-IGF2F8WCM5 200 aa13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 DNASE2O00115 360 aaPredicted RBP13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 DEDDO75618 318 aa13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 DFFBO76075 338 aa13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 CA1P00915 261 aaPredicted RBP13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 IGKV1-5P01602 117 aa13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 PGAM2P15259 253 aa13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 ELK1P19419 428 aa13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 RND3P61587 244 aa13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 NCS1P62166 190 aa13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 RBMS2Q15434 407 aaKnown RBP13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 SLC35G3Q8N808 338 aa13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 ZNF486Q96H40 463 aaPredicted RBP13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 FBXL17Q9UF56 701 aa13.72□□□□□ -0.21
TMEM41A-202ENST00000382227 TRAV2A0A0B4J234 112 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 A0A0B4J293 547 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 IGHV3-66A0A0C4DH42 116 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 HPGDSO60760 199 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 TMEM50AO95807 157 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 P0C879 139 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 PI3P19957 117 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 AKR1C2P52895 323 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 DEFB131AP59861 70 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 RPL11P62913 178 aaKnown RBP13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 LEMD1Q68G75 181 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 PVRIGQ6DKI7 326 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 TP53RKQ96S44 253 aa13.71□□□□□ -0.21
TMEM41A-202ENST00000382227 A0A1B0GU03 582 aa13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 CORTO00230 105 aa13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 TNFAIP8O95379 198 aa13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 IFNA17P01571 189 aa13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 IFNA4P05014 189 aa13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 SUB1P53999 127 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 PIGPP57054 158 aa13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 VBP1P61758 197 aa13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 TMEM187Q14656 261 aa13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 FAM24BQ8N5W8 94 aa13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 FUNDC2Q9BWH2 189 aa13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 TMEM231Q9H6L2 316 aa13.7□□□□□ -0.22
TMEM41A-202ENST00000382227 DEFB4AO15263 64 aa13.69□□□□□ -0.22
TMEM41A-202ENST00000382227 ATG12O94817 140 aa13.69□□□□□ -0.22
TMEM41A-202ENST00000382227 RNASE2P10153 161 aaKnown RBP13.69□□□□□ -0.22
TMEM41A-202ENST00000382227 RNASE10Q5GAN6 216 aaKnown RBP13.69□□□□□ -0.22
TMEM41A-202ENST00000382227 LHFPL1Q86WI0 220 aa13.69□□□□□ -0.22
TMEM41A-202ENST00000382227 ARRDC1Q8N5I2 433 aa13.69□□□□□ -0.22
TMEM41A-202ENST00000382227 PDCD10Q9BUL8 212 aa13.69□□□□□ -0.22
TMEM41A-202ENST00000382227 KLK11Q9UBX7 282 aa13.69□□□□□ -0.22
TMEM41A-202ENST00000382227 RABAC1Q9UI14 185 aa13.69□□□□□ -0.22
TMEM41A-202ENST00000382227 C3orf85A0A1B0GTC6 90 aa13.68□□□□□ -0.22
TMEM41A-202ENST00000382227 A0A1W2PS18 150 aa13.68□□□□□ -0.22
TMEM41A-202ENST00000382227 NPPCP23582 126 aa13.68□□□□□ -0.22
TMEM41A-202ENST00000382227 ETV6P41212 452 aa13.68□□□□□ -0.22
TMEM41A-202ENST00000382227 RNASE12Q5GAN4 147 aaKnown RBP13.68□□□□□ -0.22
TMEM41A-202ENST00000382227 FAM25AB3EWG3 89 aa13.67□□□□□ -0.22
TMEM41A-202ENST00000382227 FAM25CB3EWG5 89 aa13.67□□□□□ -0.22
TMEM41A-202ENST00000382227 FAM25GB3EWG6 89 aa13.67□□□□□ -0.22
TMEM41A-202ENST00000382227 CLN5O75503 358 aa13.67□□□□□ -0.22
TMEM41A-202ENST00000382227 CD3DP04234 171 aa13.67□□□□□ -0.22
TMEM41A-202ENST00000382227 HOXA1P49639 335 aaPredicted RBP13.67□□□□□ -0.22
TMEM41A-202ENST00000382227 RORCP51449 518 aa13.67□□□□□ -0.22
TMEM41A-202ENST00000382227 TRIM16LQ309B1 348 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms