RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 HERC2O95714 4834 aa16.91■□□□□ 0.3
U2AF1-202ENST00000380276 HLA-DMAP28067 261 aa16.91■□□□□ 0.3
U2AF1-202ENST00000380276 HRH1P35367 487 aa16.91■□□□□ 0.3
U2AF1-202ENST00000380276 TSPAN5P62079 268 aa16.91■□□□□ 0.3
U2AF1-202ENST00000380276 FAM90A2PQ658T7 463 aa16.91■□□□□ 0.3
U2AF1-202ENST00000380276 TBC1D26Q86UD7 250 aa16.91■□□□□ 0.3
U2AF1-202ENST00000380276 CADM3Q8N126 398 aa16.91■□□□□ 0.3
U2AF1-202ENST00000380276 ST8SIA2Q92186 375 aa16.91■□□□□ 0.3
U2AF1-202ENST00000380276 YTHDF1Q9BYJ9 559 aaKnown RBP16.91■□□□□ 0.3
U2AF1-202ENST00000380276 IGLL5B9A064 214 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 ERHP84090 104 aaKnown RBP16.9■□□□□ 0.3
U2AF1-202ENST00000380276 PRR20EP86478 221 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 PRR20CP86479 221 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 PRR20DP86480 221 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 PRR20BP86481 221 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 PRR20AP86496 221 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 SPINK9Q5DT21 86 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 SAMD12Q8N8I0 201 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 MS4A6AQ9H2W1 248 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 RABAC1Q9UI14 185 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 ANAPC10Q9UM13 185 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 DNAH10Q8IVF4 4471 aa16.9■□□□□ 0.3
U2AF1-202ENST00000380276 APOHP02749 345 aaPredicted RBP16.89■□□□□ 0.29
U2AF1-202ENST00000380276 PRSS3P35030 304 aa16.89■□□□□ 0.29
U2AF1-202ENST00000380276 TGFBR1P36897 503 aa16.89■□□□□ 0.29
U2AF1-202ENST00000380276 PRCDQ00LT1 54 aa16.89■□□□□ 0.29
U2AF1-202ENST00000380276 TOMM20LQ6UXN7 152 aa16.89■□□□□ 0.29
U2AF1-202ENST00000380276 STHQ8IWL8 128 aa16.89■□□□□ 0.29
U2AF1-202ENST00000380276 MRGPRFQ96AM1 343 aa16.89■□□□□ 0.29
U2AF1-202ENST00000380276 TMEM127O75204 238 aa16.88■□□□□ 0.29
U2AF1-202ENST00000380276 DFFBO76075 338 aa16.88■□□□□ 0.29
U2AF1-202ENST00000380276 CD5P06127 495 aa16.88■□□□□ 0.29
U2AF1-202ENST00000380276 LPCAT3Q6P1A2 487 aa16.88■□□□□ 0.29
U2AF1-202ENST00000380276 CROCCP3Q8IVE0 287 aa16.88■□□□□ 0.29
U2AF1-202ENST00000380276 DUSP18Q8NEJ0 188 aa16.88■□□□□ 0.29
U2AF1-202ENST00000380276 SEC22AQ96IW7 307 aa16.88■□□□□ 0.29
U2AF1-202ENST00000380276 PUS1Q9Y606 427 aaKnown RBP eCLIP16.88■□□□□ 0.29
U2AF1-202ENST00000380276 NAT1P18440 290 aa16.87■□□□□ 0.29
U2AF1-202ENST00000380276 NPBWR1P48145 328 aa16.87■□□□□ 0.29
U2AF1-202ENST00000380276 FAM24BQ8N5W8 94 aa16.87■□□□□ 0.29
U2AF1-202ENST00000380276 ZNF114Q8NC26 417 aa16.87■□□□□ 0.29
U2AF1-202ENST00000380276 TCTAP57738 103 aa16.86■□□□□ 0.29
U2AF1-202ENST00000380276 HSPE1P61604 102 aaKnown RBP16.86■□□□□ 0.29
U2AF1-202ENST00000380276 ZNF600Q6ZNG1 722 aa16.86■□□□□ 0.29
U2AF1-202ENST00000380276 LILRB2Q8N423 598 aa16.86■□□□□ 0.29
U2AF1-202ENST00000380276 TMEM231Q9H6L2 316 aa16.86■□□□□ 0.29
U2AF1-202ENST00000380276 VSIRQ9H7M9 311 aa16.86■□□□□ 0.29
U2AF1-202ENST00000380276 IGKV1-39P01597 117 aa16.85■□□□□ 0.29
U2AF1-202ENST00000380276 IGKV1D-39P04432 117 aa16.85■□□□□ 0.29
U2AF1-202ENST00000380276 SNCAP37840 140 aa16.85■□□□□ 0.29
U2AF1-202ENST00000380276 LSM3P62310 102 aaKnown RBP16.85■□□□□ 0.29
U2AF1-202ENST00000380276 IZUMO4Q1ZYL8 232 aa16.85■□□□□ 0.29
U2AF1-202ENST00000380276 LYSMD2Q8IV50 215 aa16.85■□□□□ 0.29
U2AF1-202ENST00000380276 CENPSQ8N2Z9 138 aa16.85■□□□□ 0.29
U2AF1-202ENST00000380276 SLC35G3Q8N808 338 aa16.85■□□□□ 0.29
U2AF1-202ENST00000380276 STXBP6Q8NFX7 210 aa16.85■□□□□ 0.29
U2AF1-202ENST00000380276 FAM212BQ9NTI7 297 aaPredicted RBP16.85■□□□□ 0.29
U2AF1-202ENST00000380276 IGHV4-28A0A0C4DH34 117 aa16.83■□□□□ 0.28
U2AF1-202ENST00000380276 C11orf94C9JXX5 98 aa16.83■□□□□ 0.28
U2AF1-202ENST00000380276 ATP6V1G2O95670 118 aa16.83■□□□□ 0.28
U2AF1-202ENST00000380276 RPS19P39019 145 aaKnown RBP16.83■□□□□ 0.28
U2AF1-202ENST00000380276 SNX29P2Q8IUI4 249 aa16.83■□□□□ 0.28
U2AF1-202ENST00000380276 ZFAND3Q9H8U3 227 aa16.83■□□□□ 0.28
U2AF1-202ENST00000380276 APLNQ9ULZ1 77 aa16.83■□□□□ 0.28
U2AF1-202ENST00000380276 IFNA17P01571 189 aa16.82■□□□□ 0.28
U2AF1-202ENST00000380276 NPPCP23582 126 aa16.82■□□□□ 0.28
U2AF1-202ENST00000380276 Q8NAQ8 132 aa16.82■□□□□ 0.28
U2AF1-202ENST00000380276 PDCD10Q9BUL8 212 aa16.82■□□□□ 0.28
U2AF1-202ENST00000380276 TRAV2A0A0B4J234 112 aa16.81■□□□□ 0.28
U2AF1-202ENST00000380276 A0A1B0GU03 582 aa16.81■□□□□ 0.28
U2AF1-202ENST00000380276 A0A1W2PS18 150 aa16.81■□□□□ 0.28
U2AF1-202ENST00000380276 PGAM2P15259 253 aa16.81■□□□□ 0.28
U2AF1-202ENST00000380276 HOXA1P49639 335 aaPredicted RBP16.81■□□□□ 0.28
U2AF1-202ENST00000380276 AKR1C2P52895 323 aa16.81■□□□□ 0.28
U2AF1-202ENST00000380276 SMIM31A0A1B0GVY4 71 aa16.8■□□□□ 0.28
U2AF1-202ENST00000380276 KNCNA6PVL3 124 aa16.8■□□□□ 0.28
U2AF1-202ENST00000380276 TMEM50AO95807 157 aa16.8■□□□□ 0.28
U2AF1-202ENST00000380276 ZNF688P0C7X2 276 aa16.8■□□□□ 0.28
U2AF1-202ENST00000380276 HLA-DMBP28068 263 aa16.8■□□□□ 0.28
U2AF1-202ENST00000380276 GPX8Q8TED1 209 aa16.8■□□□□ 0.28
U2AF1-202ENST00000380276 TMEM230Q96A57 120 aa16.8■□□□□ 0.28
U2AF1-202ENST00000380276 NARS2Q96I59 477 aaKnown RBP16.8■□□□□ 0.28
U2AF1-202ENST00000380276 METTL26Q96S19 204 aa16.8■□□□□ 0.28
U2AF1-202ENST00000380276 ENY2Q9NPA8 101 aa16.8■□□□□ 0.28
U2AF1-202ENST00000380276 COMMD3Q9UBI1 195 aa16.8■□□□□ 0.28
U2AF1-202ENST00000380276 RBMY1A1P0DJD3 496 aaKnown RBP16.79■□□□□ 0.28
U2AF1-202ENST00000380276 RBMY1CP0DJD4 496 aa16.79■□□□□ 0.28
U2AF1-202ENST00000380276 RCVRNP35243 200 aa16.79■□□□□ 0.28
U2AF1-202ENST00000380276 OPRK1P41145 380 aa16.79■□□□□ 0.28
U2AF1-202ENST00000380276 SUB1P53999 127 aaKnown RBP eCLIP16.79■□□□□ 0.28
U2AF1-202ENST00000380276 RBMY1FQ15415 496 aaKnown RBP16.79■□□□□ 0.28
U2AF1-202ENST00000380276 RNASE12Q5GAN4 147 aaKnown RBP16.79■□□□□ 0.28
U2AF1-202ENST00000380276 Q6ZTC4 211 aa16.79■□□□□ 0.28
U2AF1-202ENST00000380276 TRPT1Q86TN4 253 aaKnown RBP16.79■□□□□ 0.28
U2AF1-202ENST00000380276 HRH4Q9H3N8 390 aa16.79■□□□□ 0.28
U2AF1-202ENST00000380276 CLEC5AQ9NY25 188 aa16.79■□□□□ 0.28
U2AF1-202ENST00000380276 TRAV10A0A0B4J240 114 aa16.78■□□□□ 0.28
U2AF1-202ENST00000380276 M0QYG6 137 aa16.78■□□□□ 0.28
U2AF1-202ENST00000380276 CORTO00230 105 aa16.78■□□□□ 0.28
U2AF1-202ENST00000380276 SCGB2A1O75556 95 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms