RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 KMT2AQ03164 3969 aa13.62□□□□□ -0.23
HDAC6-202ENST00000376610 RCVRNP35243 200 aa13.62□□□□□ -0.23
HDAC6-202ENST00000376610 NPBWR1P48145 328 aa13.62□□□□□ -0.23
HDAC6-202ENST00000376610 UCP3P55916 312 aa13.62□□□□□ -0.23
HDAC6-202ENST00000376610 SNX29P2Q8IUI4 249 aa13.62□□□□□ -0.23
HDAC6-202ENST00000376610 GBGT1Q8N5D6 347 aa13.62□□□□□ -0.23
HDAC6-202ENST00000376610 MFFQ9GZY8 342 aa13.62□□□□□ -0.23
HDAC6-202ENST00000376610 IGHV3OR16-13A0A075B7E8 117 aa13.61□□□□□ -0.23
HDAC6-202ENST00000376610 A0A087WXM4 84 aa13.61□□□□□ -0.23
HDAC6-202ENST00000376610 IGHV3-74A0A0B4J1X5 117 aa13.61□□□□□ -0.23
HDAC6-202ENST00000376610 DNASE2O00115 360 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-202ENST00000376610 IGHV3-48P01763 117 aa13.61□□□□□ -0.23
HDAC6-202ENST00000376610 APOA1P02647 267 aa13.61□□□□□ -0.23
HDAC6-202ENST00000376610 SNCAP37840 140 aa13.61□□□□□ -0.23
HDAC6-202ENST00000376610 ZNF124Q15973 351 aa13.61□□□□□ -0.23
HDAC6-202ENST00000376610 TCF24Q7RTU0 167 aa13.61□□□□□ -0.23
HDAC6-202ENST00000376610 DUSP18Q8NEJ0 188 aa13.61□□□□□ -0.23
HDAC6-202ENST00000376610 YIPF6Q96EC8 236 aa13.61□□□□□ -0.23
HDAC6-202ENST00000376610 FRAS1Q86XX4 4008 aa13.6□□□□□ -0.23
HDAC6-202ENST00000376610 ST8SIA3O43173 380 aa13.6□□□□□ -0.23
HDAC6-202ENST00000376610 ATG12O94817 140 aa13.6□□□□□ -0.23
HDAC6-202ENST00000376610 IFNA4P05014 189 aa13.6□□□□□ -0.23
HDAC6-202ENST00000376610 RPL11P62913 178 aaKnown RBP13.6□□□□□ -0.23
HDAC6-202ENST00000376610 SLC35G3Q8N808 338 aa13.6□□□□□ -0.23
HDAC6-202ENST00000376610 PDCD10Q9BUL8 212 aa13.6□□□□□ -0.23
HDAC6-202ENST00000376610 TMEM231Q9H6L2 316 aa13.6□□□□□ -0.23
HDAC6-202ENST00000376610 SCGB2A1O75556 95 aa13.59□□□□□ -0.23
HDAC6-202ENST00000376610 CA1P00915 261 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-202ENST00000376610 IGKV1-39P01597 117 aa13.59□□□□□ -0.23
HDAC6-202ENST00000376610 IGKV1D-39P04432 117 aa13.59□□□□□ -0.23
HDAC6-202ENST00000376610 PGAM2P15259 253 aa13.59□□□□□ -0.23
HDAC6-202ENST00000376610 AKR1C2P52895 323 aa13.59□□□□□ -0.23
HDAC6-202ENST00000376610 RBMS2Q15434 407 aaKnown RBP13.59□□□□□ -0.23
HDAC6-202ENST00000376610 FAM90A2PQ658T7 463 aa13.59□□□□□ -0.23
HDAC6-202ENST00000376610 TOMM20LQ6UXN7 152 aa13.59□□□□□ -0.23
HDAC6-202ENST00000376610 OR11H2Q8NH07 326 aa13.59□□□□□ -0.23
HDAC6-202ENST00000376610 C11orf45Q8TAV5 145 aa13.59□□□□□ -0.23
HDAC6-202ENST00000376610 DFFBO76075 338 aa13.58□□□□□ -0.24
HDAC6-202ENST00000376610 IFNA17P01571 189 aa13.58□□□□□ -0.24
HDAC6-202ENST00000376610 SUB1P53999 127 aaKnown RBP eCLIP13.58□□□□□ -0.24
HDAC6-202ENST00000376610 SPINK9Q5DT21 86 aa13.58□□□□□ -0.24
HDAC6-202ENST00000376610 LGALS9CQ6DKI2 356 aa13.58□□□□□ -0.24
HDAC6-202ENST00000376610 ZNF600Q6ZNG1 722 aa13.58□□□□□ -0.24
HDAC6-202ENST00000376610 ST8SIA2Q92186 375 aa13.58□□□□□ -0.24
HDAC6-202ENST00000376610 ZNF486Q96H40 463 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-202ENST00000376610 C11orf68Q9H3H3 251 aaKnown RBP13.58□□□□□ -0.24
HDAC6-202ENST00000376610 FBXL17Q9UF56 701 aa13.58□□□□□ -0.24
HDAC6-202ENST00000376610 PUS1Q9Y606 427 aaKnown RBP eCLIP13.58□□□□□ -0.24
HDAC6-202ENST00000376610 CORTO00230 105 aa13.57□□□□□ -0.24
HDAC6-202ENST00000376610 TNFAIP8O95379 198 aa13.57□□□□□ -0.24
HDAC6-202ENST00000376610 TMEM187Q14656 261 aa13.57□□□□□ -0.24
HDAC6-202ENST00000376610 ZNF414Q96IQ9 312 aa13.57□□□□□ -0.24
HDAC6-202ENST00000376610 MS4A6AQ9H2W1 248 aa13.57□□□□□ -0.24
HDAC6-202ENST00000376610 VSIRQ9H7M9 311 aa13.57□□□□□ -0.24
HDAC6-202ENST00000376610 ENY2Q9NPA8 101 aa13.57□□□□□ -0.24
HDAC6-202ENST00000376610 TRAV2A0A0B4J234 112 aa13.56□□□□□ -0.24
HDAC6-202ENST00000376610 A0A1W2PS18 150 aa13.56□□□□□ -0.24
HDAC6-202ENST00000376610 M0QYG6 137 aa13.56□□□□□ -0.24
HDAC6-202ENST00000376610 HOXA1P49639 335 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-202ENST00000376610 NANOS2P60321 138 aaKnown RBP13.56□□□□□ -0.24
HDAC6-202ENST00000376610 RND3P61587 244 aa13.56□□□□□ -0.24
HDAC6-202ENST00000376610 RNASE10Q5GAN6 216 aaKnown RBP13.56□□□□□ -0.24
HDAC6-202ENST00000376610 RPP25LQ8N5L8 163 aaKnown RBP13.56□□□□□ -0.24
HDAC6-202ENST00000376610 RABAC1Q9UI14 185 aa13.56□□□□□ -0.24
HDAC6-202ENST00000376610 IGHV3-66A0A0C4DH42 116 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 FAM25AB3EWG3 89 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 FAM25CB3EWG5 89 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 FAM25GB3EWG6 89 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 ELK1P19419 428 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 PIGPP57054 158 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 DEFB131AP59861 70 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 NCS1P62166 190 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 IZUMO4Q1ZYL8 232 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 LEMD1Q68G75 181 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 MZT2AQ6P582 158 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 STHQ8IWL8 128 aa13.55□□□□□ -0.24
HDAC6-202ENST00000376610 RNASE11Q8TAA1 199 aaKnown RBP13.55□□□□□ -0.24
HDAC6-202ENST00000376610 NARS2Q96I59 477 aaKnown RBP13.55□□□□□ -0.24
HDAC6-202ENST00000376610 INS-IGF2F8WCM5 200 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 HPGDSO60760 199 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 TMEM50AO95807 157 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 PI3P19957 117 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 NPPCP23582 126 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 RORCP51449 518 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 VBP1P61758 197 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 TRIM16LQ309B1 348 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 ARRDC1Q8N5I2 433 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 CCDC71LQ8N9Z2 235 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 RRNAD1Q96FB5 475 aaKnown RBP13.54□□□□□ -0.24
HDAC6-202ENST00000376610 METTL26Q96S19 204 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 ZFAND3Q9H8U3 227 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 COPZ2Q9P299 210 aa13.54□□□□□ -0.24
HDAC6-202ENST00000376610 A0A0B4J293 547 aa13.53□□□□□ -0.24
HDAC6-202ENST00000376610 C3orf85A0A1B0GTC6 90 aa13.53□□□□□ -0.24
HDAC6-202ENST00000376610 DEDDO75618 318 aa13.53□□□□□ -0.24
HDAC6-202ENST00000376610 IGKV1-5P01602 117 aa13.53□□□□□ -0.24
HDAC6-202ENST00000376610 APOHP02749 345 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-202ENST00000376610 TBPP20226 339 aa13.53□□□□□ -0.24
HDAC6-202ENST00000376610 OPRK1P41145 380 aa13.53□□□□□ -0.24
HDAC6-202ENST00000376610 TCTAP57738 103 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms