RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 ZNF785A8K8V0 405 aa11.14□□□□□ -0.63
CLIC4-201ENST00000374379 CBLN1P23435 193 aa11.14□□□□□ -0.63
CLIC4-201ENST00000374379 ZNF788Q6ZQV5 615 aa11.14□□□□□ -0.63
CLIC4-201ENST00000374379 OR2D3Q8NGH3 330 aa11.14□□□□□ -0.63
CLIC4-201ENST00000374379 IMMP2LQ96T52 175 aa11.14□□□□□ -0.63
CLIC4-201ENST00000374379 NCKAP5O14513 1909 aa11.14□□□□□ -0.63
CLIC4-201ENST00000374379 TMEM178BH3BS89 294 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 LCN2P80188 198 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 MBD3L1Q8WWY6 194 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 PERPQ96FX8 193 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 IGHV3OR16-13A0A075B7E8 117 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 IGHV3-74A0A0B4J1X5 117 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 CSN3P07498 182 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 AMTP48728 403 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 PPOXP50336 477 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 MFAP2P55001 183 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 CENPWQ5EE01 88 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 PRR31Q5SQ13 230 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 GFI1BQ5VTD9 330 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 TNRC6AQ8NDV7 1962 aaKnown RBP11.13□□□□□ -0.63
CLIC4-201ENST00000374379 TRAV5A0A0B4J249 113 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 EFNB3Q15768 340 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 SSX7Q7RTT5 188 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 SLX1AQ9BQ83 275 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 PITPNC1Q9UKF7 332 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 TEX50A0A1B0GTY4 177 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 E7EQL1 145 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 FOXH1O75593 365 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 LIPFP07098 398 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 PYYP10082 97 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 ZNF726P1Q15940 193 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 MGST2Q99735 147 aa11.13□□□□□ -0.63
CLIC4-201ENST00000374379 HIST1H1BP16401 226 aaKnown RBP11.12□□□□□ -0.63
CLIC4-201ENST00000374379 RNASEKQ6P5S7 137 aaKnown RBP11.12□□□□□ -0.63
CLIC4-201ENST00000374379 LINC00305Q7Z4B0 112 aa11.12□□□□□ -0.63
CLIC4-201ENST00000374379 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.12□□□□□ -0.63
CLIC4-201ENST00000374379 MGAQ8IWI9 3026 aa11.12□□□□□ -0.63
CLIC4-201ENST00000374379 LOC105371242A0A075B767 164 aa11.12□□□□□ -0.63
CLIC4-201ENST00000374379 RBFOX2O43251 390 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■■■□ 23.3
CLIC4-201ENST00000374379 MEF2CQ06413 473 aaPredicted RBP11.12□□□□□ -0.63
CLIC4-201ENST00000374379 HLA-DRB5Q30154 266 aa11.12□□□□□ -0.63
CLIC4-201ENST00000374379 TCF23Q7RTU1 214 aa11.12□□□□□ -0.63
CLIC4-201ENST00000374379 SFRP2Q96HF1 295 aa11.12□□□□□ -0.63
CLIC4-201ENST00000374379 VKORC1Q9BQB6 163 aa11.12□□□□□ -0.63
CLIC4-201ENST00000374379 C15orf65H3BRN8 121 aa11.12□□□□□ -0.63
CLIC4-201ENST00000374379 CLEC3BP05452 202 aa11.12□□□□□ -0.63
CLIC4-201ENST00000374379 IBA57Q5T440 356 aaKnown RBP11.12□□□□□ -0.63
CLIC4-201ENST00000374379 IGFL3Q6UXB1 125 aa11.12□□□□□ -0.63
CLIC4-201ENST00000374379 ZNF586Q9NXT0 402 aa11.12□□□□□ -0.63
CLIC4-201ENST00000374379 CXorf65A6NEN9 183 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 COL8A2P25067 703 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 COL8A1P27658 744 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 HEPN1Q6WQI6 88 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 PRNTQ86SH4 94 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 GSX1Q9H4S2 264 aaPredicted RBP11.11□□□□□ -0.63
CLIC4-201ENST00000374379 J3KRW8 73 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 DIAPH2-AS1Q14236 149 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 RBM14Q96PK6 669 aaKnown RBP11.11□□□□□ -0.63
CLIC4-201ENST00000374379 AAMDCQ9H7C9 122 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 F2RL2O00254 374 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 GRNP28799 593 aaKnown RBP11.11□□□□□ -0.63
CLIC4-201ENST00000374379 CD81P60033 236 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 C22orf34Q6ZV56 151 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 TMEM133Q9H2Q1 129 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 ZNF672Q499Z4 452 aaPredicted RBP11.11□□□□□ -0.63
CLIC4-201ENST00000374379 TXN2Q99757 166 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 OR51M1Q9H341 326 aa11.11□□□□□ -0.63
CLIC4-201ENST00000374379 WNT2P09544 360 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 FCGR2BP31994 310 aaPredicted RBP11.1□□□□□ -0.63
CLIC4-201ENST00000374379 CEACAM8P31997 349 aaPredicted RBP11.1□□□□□ -0.63
CLIC4-201ENST00000374379 C17orf58Q2M2W7 97 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 IGFL2Q6UWQ7 119 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 TMEM144Q7Z5S9 345 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 SLC25A33Q9BSK2 321 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIGD1AQ9Y241 93 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 CDX1P47902 265 aaPredicted RBP11.1□□□□□ -0.63
CLIC4-201ENST00000374379 LGALS7P47929 136 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 FAM90A2PQ658T7 463 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 RNASE7Q9H1E1 156 aaKnown RBP11.1□□□□□ -0.63
CLIC4-201ENST00000374379 THYN1Q9P016 225 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 TLN2Q9Y4G6 2542 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 MYO18BQ8IUG5 2567 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 ZFYVE26Q68DK2 2539 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIST1H2BKO60814 126 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIST1H2BJP06899 126 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIST1H2BOP23527 126 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIST1H2BBP33778 126 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIST1H2BDP58876 126 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 TPPP2P59282 170 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIST1H2BCP62807 126 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 PRCDQ00LT1 54 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 KLRD1Q13241 179 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIST2H2BEQ16778 126 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 KHDC1LQ5JSQ8 128 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.1□□□□□ -0.63
CLIC4-201ENST00000374379 IGFBPL1Q8WX77 278 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 ZCCHC14Q8WYQ9 949 aaKnown RBP11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIST1H2BHQ93079 126 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIST1H2BNQ99877 126 aa11.1□□□□□ -0.63
CLIC4-201ENST00000374379 HIST1H2BMQ99879 126 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms