RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 HBBP68871 147 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 IFITM2Q01629 132 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 FBLN7Q53RD9 439 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 ZNF256Q9Y2P7 627 aaPredicted RBP10.74□□□□□ -0.69
PTPRK-207ENST00000368226 CBY1Q9Y3M2 126 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 TCF21O43680 179 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 PPIFP30405 207 aaKnown RBP10.74□□□□□ -0.69
PTPRK-207ENST00000368226 STHQ8IWL8 128 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 TRBV6-7A0A0A0MS04 114 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 PYYP10082 97 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 NEUROG1Q92886 237 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 TOMM7Q9P0U1 55 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 UPK2O00526 184 aa10.73□□□□□ -0.69
PTPRK-207ENST00000368226 SAPCD1Q5SSQ6 148 aa10.73□□□□□ -0.69
PTPRK-207ENST00000368226 OR10AG1Q8NH19 301 aa10.73□□□□□ -0.69
PTPRK-207ENST00000368226 C10orf55Q5SWW7 151 aa10.73□□□□□ -0.69
PTPRK-207ENST00000368226 ZNF362Q5T0B9 420 aaPredicted RBP10.73□□□□□ -0.69
PTPRK-207ENST00000368226 KCNS1Q96KK3 526 aa10.73□□□□□ -0.69
PTPRK-207ENST00000368226 LILRA1O75019 489 aa10.73□□□□□ -0.69
PTPRK-207ENST00000368226 NHLRC3Q5JS37 347 aa10.73□□□□□ -0.69
PTPRK-207ENST00000368226 ZNF585BQ52M93 769 aa10.73□□□□□ -0.69
PTPRK-207ENST00000368226 FAM131CQ96AQ9 280 aa10.73□□□□□ -0.69
PTPRK-207ENST00000368226 PRSS22Q9GZN4 317 aa10.73□□□□□ -0.69
PTPRK-207ENST00000368226 ANK1P16157 1881 aa10.73□□□□□ -0.69
PTPRK-207ENST00000368226 FAM90A1Q86YD7 464 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 DICER1Q9UPY3 1922 aaKnown RBP10.72□□□□□ -0.69
PTPRK-207ENST00000368226 TRAV8-6A0A0B4J262 113 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 IGKV1-12A0A0C4DH73 117 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 IGKV1D-12P01611 117 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 PEMTQ9UBM1 199 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 SPTBN2O15020 2390 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 IGLV3-32A0A0A0MS00 114 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 CD7P09564 240 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 MAPK1IP1LQ8NDC0 245 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 CD8AP01732 235 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 CLPSP04118 112 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 GFI1BQ5VTD9 330 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 PSMG3Q9BT73 122 aaPredicted RBP10.72□□□□□ -0.69
PTPRK-207ENST00000368226 DOCK6Q96HP0 2047 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 REC114Q7Z4M0 266 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 HIST1H2BAQ96A08 127 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 PRELID3AQ96N28 172 aa10.72□□□□□ -0.69
PTPRK-207ENST00000368226 YPEL1O60688 119 aa10.71□□□□□ -0.69
PTPRK-207ENST00000368226 MRAP2Q96G30 205 aa10.71□□□□□ -0.69
PTPRK-207ENST00000368226 YPEL2Q96QA6 119 aa10.71□□□□□ -0.69
PTPRK-207ENST00000368226 ZNF525Q8N782 197 aa10.71□□□□□ -0.69
PTPRK-207ENST00000368226 ST6GALNAC6Q969X2 333 aa10.71□□□□□ -0.69
PTPRK-207ENST00000368226 TMEM101Q96IK0 257 aa10.71□□□□□ -0.69
PTPRK-207ENST00000368226 RNASE7Q9H1E1 156 aaKnown RBP10.71□□□□□ -0.69
PTPRK-207ENST00000368226 SLC25A28Q96A46 364 aa10.71□□□□□ -0.69
PTPRK-207ENST00000368226 C18orf12Q96KH6 178 aa10.71□□□□□ -0.69
PTPRK-207ENST00000368226 HEATR5BQ9P2D3 2071 aa10.71□□□□□ -0.7
PTPRK-207ENST00000368226 C15orf61A6NNL5 157 aa10.71□□□□□ -0.7
PTPRK-207ENST00000368226 FOLR2P14207 255 aa10.71□□□□□ -0.7
PTPRK-207ENST00000368226 ST6GALNAC3Q8NDV1 305 aa10.71□□□□□ -0.7
PTPRK-207ENST00000368226 APOHP02749 345 aaPredicted RBP10.71□□□□□ -0.7
PTPRK-207ENST00000368226 PLSCR2Q9NRY7 297 aa10.71□□□□□ -0.7
PTPRK-207ENST00000368226 IGKV1-27A0A075B6S5 117 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 TRAV14DV4A0A0A6YYC5 116 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 CXorf65A6NEN9 183 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 F8VVB4 439 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 F8VWA3 439 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 RTTNQ86VV8 2226 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 GFI1Q99684 422 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 IL18BPO95998 194 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 TMEM200BQ69YZ2 307 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 NABP1Q96AH0 204 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 C8orf46Q8TAG6 207 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 TMEM70Q9BUB7 260 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 IGHV2-26A0A0B4J1V2 119 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 GPX4P36969 197 aaPredicted RBP10.7□□□□□ -0.7
PTPRK-207ENST00000368226 ZNF506Q5JVG8 444 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 RNF144BQ7Z419 303 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 SSBP4Q9BWG4 385 aaPredicted RBP10.7□□□□□ -0.7
PTPRK-207ENST00000368226 ARHGEF17Q96PE2 2063 aaPredicted RBP10.7□□□□□ -0.7
PTPRK-207ENST00000368226 RNASEH2CQ8TDP1 164 aaKnown RBP10.7□□□□□ -0.7
PTPRK-207ENST00000368226 SDF2L1Q9HCN8 221 aa10.7□□□□□ -0.7
PTPRK-207ENST00000368226 RALGAPA1Q6GYQ0 2036 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 TMEM238LA0A1B0GVL6 79 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 A6NJY4 79 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 CRYGSP22914 178 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 RNF125Q96EQ8 232 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 PLSCR4Q9NRQ2 329 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 TRAV5A0A0B4J249 113 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 ZNF324BQ6AW86 544 aaPredicted RBP10.69□□□□□ -0.7
PTPRK-207ENST00000368226 TMEM167AQ8TBQ9 72 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 CACNA1GO43497 2377 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 C1QTNF9BB2RNN3 333 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 MYOD1P15172 320 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 TIMP3P35625 211 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 CIRBPQ14011 172 aaKnown RBP10.69□□□□□ -0.7
PTPRK-207ENST00000368226 TMEM136Q6ZRR5 245 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 GVINP1Q7Z2Y8 2422 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 CD177Q8N6Q3 437 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 FMC1Q96HJ9 113 aa10.69□□□□□ -0.7
PTPRK-207ENST00000368226 RPP21Q9H633 154 aaKnown RBP10.69□□□□□ -0.7
PTPRK-207ENST00000368226 PGPEP1LA6NFU8 196 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 NDUFA3O95167 84 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 COX6CP09669 75 aa10.68□□□□□ -0.7
PTPRK-207ENST00000368226 RIPPLY3P57055 190 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms