RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 IGLV1-40P01703 118 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 PSMB8P28062 276 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 RPL27AP46776 148 aaKnown RBP3.13□□□□□ -1.91
LIG4-201ENST00000356922 RRAS2P62070 204 aaPredicted RBP3.13□□□□□ -1.91
LIG4-201ENST00000356922 AKIRIN2Q53H80 203 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 FAM209BQ5JX69 171 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 LINC00518Q8N0U6 118 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 OR11H4Q8NGC9 324 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 DPF1Q92782 380 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 CITED2Q99967 270 aaPredicted RBP3.13□□□□□ -1.91
LIG4-201ENST00000356922 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.13□□□□□ -1.91
LIG4-201ENST00000356922 MGAT4CQ9UBM8 478 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 SORL1Q92673 2214 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 PRKDCP78527 4128 aaKnown RBP3.13□□□□□ -1.91
LIG4-201ENST00000356922 A0A1B0GU03 582 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 F8W735 103 aaPredicted RBP3.13□□□□□ -1.91
LIG4-201ENST00000356922 AP4M1O00189 453 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 NDUFB8O95169 186 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 CAV2P51636 162 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 SUB1P53999 127 aaKnown RBP eCLIP3.13□□□□□ -1.91
LIG4-201ENST00000356922 PRCDQ00LT1 54 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 DEFB136Q30KP8 78 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 NSUN5P1Q3KNT7 163 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 C16orf82Q7Z2V1 217 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 HAPLN4Q86UW8 402 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 OR5AU1Q8NGC0 362 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 PPP1R1CQ8WVI7 109 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 OR4C12Q96R67 309 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 RANGRFQ9HD47 186 aaPredicted RBP3.13□□□□□ -1.91
LIG4-201ENST00000356922 PRNDQ9UKY0 176 aa3.13□□□□□ -1.91
LIG4-201ENST00000356922 TMEM89A2RUT3 159 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 CLPSL1A2RUU4 121 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 PSMB11A5LHX3 300 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 MFSD2BA6NFX1 497 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 PRAF2O60831 178 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 YIF1AO95070 293 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 IGHV3-11P01762 117 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 RAB9AP51151 201 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 RPP30P78346 268 aaKnown RBP3.12□□□□□ -1.91
LIG4-201ENST00000356922 FOXL1Q12952 345 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 BSXQ3C1V8 233 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 PDLIM3Q53GG5 364 aaPredicted RBP3.12□□□□□ -1.91
LIG4-201ENST00000356922 TTC9CQ8N5M4 171 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 OR1L8Q8NGR8 309 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 MISP3Q96FF7 219 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 ST6GAL2Q96JF0 529 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 RFNGQ9Y644 331 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 TRBV9A0A0B4J1U6 114 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 TCRBV4S1A1TA0A5B7 111 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 C15orf62A8K5M9 175 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 PMS2P5A8MQ11 134 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 K7EPK0 472 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 SSSCA1O60232 199 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 SCGB2A1O75556 95 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 OR2J3O76001 311 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 NDUFA7O95182 113 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 IGHG4P01861 327 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 CRYGCP07315 174 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 FGF2P09038 288 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 TRAPPC2P0DI81 140 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 TRAPPC2BP0DI82 140 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 RNASE2P10153 161 aaKnown RBP3.12□□□□□ -1.91
LIG4-201ENST00000356922 EDN2P20800 178 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 NKX2-1P43699 371 aaPredicted RBP3.12□□□□□ -1.91
LIG4-201ENST00000356922 CRIP2P52943 208 aaPredicted RBP3.12□□□□□ -1.91
LIG4-201ENST00000356922 OR2C3Q8N628 320 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 OR4A5Q8NH83 315 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 WFDC12Q8WWY7 111 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 C2orf50Q96LR7 162 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 THYN1Q9P016 225 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 ZNF257Q9Y2Q1 563 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 TGP01266 2768 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 IGLV11-55A0A075B6I3 123 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 IGKV1OR2-108A0A075B7D4 117 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 IGHV3-35A0A0C4DH35 117 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 RAB19A4D1S5 217 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 FAM24AA6NFZ4 105 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 ZNF98A6NK75 572 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 PRSS46E5RG02 174 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 I3L521 148 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 K7EIM0 57 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 SYNGR2O43760 224 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 MED6O75586 246 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 PF4P02776 101 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 TRGV3P03979 118 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 PSMB6P28072 239 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 TPPP2P59282 170 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 SPCS3P61009 180 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 SPANXN5Q5MJ07 72 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 OR5B3Q8NH48 314 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 DTD1Q8TEA8 209 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 SELENOKQ9Y6D0 94 aa3.12□□□□□ -1.91
LIG4-201ENST00000356922 RAB14P61106 215 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 NHLH2Q02577 135 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 OR52E5Q8NH55 327 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 THAP6Q8TBB0 222 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 SCARB1Q8WTV0 552 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 ZNF436Q9C0F3 470 aaPredicted RBP3.11□□□□□ -1.91
LIG4-201ENST00000356922 IGHV3OR16-8A0A075B7F1 116 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 DUXBA0A1W2PPF3 345 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms