RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 GCSAMLQ5JQS6 135 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 MINOS1Q5TGZ0 78 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 RBMS3Q6XE24 437 aaKnown RBP5.54□□□□□ -1.52
TRIM55-203ENST00000350034 SLC16A13Q7RTY0 426 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 CBLN2Q8IUK8 224 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 STPG3Q8N7X2 389 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 CYB561D1Q8N8Q1 229 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 NPBQ8NG41 125 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 SRSF8Q9BRL6 282 aaKnown RBP5.54□□□□□ -1.52
TRIM55-203ENST00000350034 BPESC1Q9GZL8 116 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 FNDC4Q9H6D8 234 aaPredicted RBP5.54□□□□□ -1.52
TRIM55-203ENST00000350034 TUBA4BQ9H853 241 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 MANBALQ9NQG1 85 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 TMA7Q9Y2S6 64 aaKnown RBP5.54□□□□□ -1.52
TRIM55-203ENST00000350034 MINOS1-NBL1R4GNA1 71 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 YLPM1P49750 1951 aaKnown RBP5.54□□□□□ -1.52
TRIM55-203ENST00000350034 HIVEP3Q5T1R4 2406 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 FN1P02751 2386 aaKnown RBP5.53□□□□□ -1.52
TRIM55-203ENST00000350034 ABCA4P78363 2273 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 CENPEQ02224 2701 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 ZFP92A6NM28 416 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 VWC2LB2RUY7 222 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 TEX22C9J3V5 150 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 TMEM250H0YL14 139 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 H3BQ15 152 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 EIF3GO75821 320 aaKnown RBP eCLIP5.53□□□□□ -1.52
TRIM55-203ENST00000350034 STAG3L2P0CL84 134 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 STAG3L3P0CL85 134 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 HOXB4P17483 251 aaPredicted RBP5.53□□□□□ -1.52
TRIM55-203ENST00000350034 RPL27AP46776 148 aaKnown RBP5.53□□□□□ -1.52
TRIM55-203ENST00000350034 PSMB3P49720 205 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 PDLIM4P50479 330 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 SUB1P53999 127 aaKnown RBP eCLIP5.53□□□□□ -1.52
TRIM55-203ENST00000350034 MFAP2P55001 183 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 CD81P60033 236 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 EBI3Q14213 229 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 MLANAQ16655 118 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 TMEM88Q6PEY1 159 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 VMO1Q7Z5L0 202 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 SLC35E3Q7Z769 313 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 LHFPL4Q7Z7J7 247 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 PPP1R27Q86WC6 154 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 MRPL41Q8IXM3 137 aaKnown RBP5.53□□□□□ -1.52
TRIM55-203ENST00000350034 Q8N6K4 173 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.53□□□□□ -1.52
TRIM55-203ENST00000350034 THAP8Q8NA92 274 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 SSMEM1Q8WWF3 244 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 AJUBAQ96IF1 538 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 SLC35E1Q96K37 410 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 PSMG3-AS1Q96PY0 264 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 TBX15Q96SF7 602 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 TMPRSS5Q9H3S3 457 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 FBXL15Q9H469 300 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 SMCO4Q9NRQ5 59 aa5.53□□□□□ -1.52
TRIM55-203ENST00000350034 METTL1Q9UBP6 276 aaKnown RBP5.53□□□□□ -1.52
TRIM55-203ENST00000350034 IGKV1D-37A0A075B6S9 117 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 A0A087WWC5 75 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 LOC105371267A0A1B0GV96 52 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 A0A1W2PPV4 95 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 PSMB11A5LHX3 300 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 COLCA2A8K830 154 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 TSPAN4O14817 238 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 HMGB3O15347 200 aaKnown RBP5.52□□□□□ -1.53
TRIM55-203ENST00000350034 NBR2O15453 112 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 FOXH1O75593 365 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 MOSP00540 346 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 SNRNP70P08621 437 aaKnown RBP5.52□□□□□ -1.53
TRIM55-203ENST00000350034 DEFA4P12838 97 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 AREGP15514 252 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 PAX1P15863 534 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 OR10J1P30954 320 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 MEF2BQ02080 365 aaPredicted RBP5.52□□□□□ -1.53
TRIM55-203ENST00000350034 TNXAQ16473 311 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 CCDC144NLQ6NUI1 221 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 DYNAPQ8N1N2 210 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 OR1P1Q8NH06 330 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 ABHD5Q8WTS1 349 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 GATAD1Q8WUU5 269 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 EAF1Q96JC9 268 aaPredicted RBP5.52□□□□□ -1.53
TRIM55-203ENST00000350034 YPEL4Q96NS1 127 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 C19orf24Q9BVV8 132 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 MRPL36Q9P0J6 103 aaKnown RBP5.52□□□□□ -1.53
TRIM55-203ENST00000350034 TBL2Q9Y4P3 447 aaKnown RBP5.52□□□□□ -1.53
TRIM55-203ENST00000350034 PUS1Q9Y606 427 aaKnown RBP eCLIP5.52□□□□□ -1.53
TRIM55-203ENST00000350034 DOCK11Q5JSL3 2073 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 HIVEP1P15822 2718 aa5.52□□□□□ -1.53
TRIM55-203ENST00000350034 M0R036 132 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 NDUFS8O00217 210 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 CORTO00230 105 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 FCN1O00602 326 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 PAGE4O60829 102 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 ACTL6BO94805 426 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 CXorf1O96002 111 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 OR5G3P0C626 314 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 NPPCP23582 126 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 UBE2E1P51965 193 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 RHOBP62745 196 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 LCN2P80188 198 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 PAX8Q06710 450 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 PNRC1Q12796 327 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms