RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ATP5G3P48201 142 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 GAGE1Q13065 139 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 ABHD5Q8WTS1 349 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 PXMP4Q9Y6I8 212 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 PHOX2AO14813 284 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 TGOLN2O43493 480 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 ASPHD1Q5U4P2 390 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 NDUFAF3Q9BU61 184 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 DERL1Q9BUN8 251 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 COMMD5Q9GZQ3 224 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 GSX1Q9H4S2 264 aaPredicted RBP10.18□□□□□ -0.78
LIMK1-201ENST00000336180 ZNF430Q9H8G1 570 aaPredicted RBP10.18□□□□□ -0.78
LIMK1-201ENST00000336180 TMEM14BQ9NUH8 114 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 S4R3C0 116 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 PIGBOS1A0A0B4J2F0 54 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 A0A1W2PPV4 95 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 HBE1P02100 147 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 DLX6P56179 175 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 ZNF506Q5JVG8 444 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 ZNF841Q6ZN19 808 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 ZNF833PQ6ZTB9 187 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 TCTEX1D1Q8N7M0 179 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 PSMG3Q9BT73 122 aaPredicted RBP10.18□□□□□ -0.78
LIMK1-201ENST00000336180 GGTLC1Q9BX51 225 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 IGHV2-26A0A0B4J1V2 119 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 A0A1B0GW64 132 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 A8MWP6 167 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 RBFOX2O43251 390 aaKnown RBP eCLIP10.17□□□□□ -0.78
LIMK1-201ENST00000336180 CD81P60033 236 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 MEF2CQ06413 473 aaPredicted RBP10.17□□□□□ -0.78
LIMK1-201ENST00000336180 ADIRFQ15847 76 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 HIST1H2BAQ96A08 127 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 TMEM133Q9H2Q1 129 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 SMCO4Q9NRQ5 59 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 WDR83OSQ9Y284 106 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 IGKV1OR2-108A0A075B7D4 117 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 OR2C1O95371 312 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 GNB2P62879 340 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 SERF2P84101 59 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 EFNB3Q15768 340 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 PDZD11Q5EBL8 140 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 FAM90A2PQ658T7 463 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 COMMD1Q8N668 190 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 FAM103A1Q9BTL3 118 aaKnown RBP10.17□□□□□ -0.78
LIMK1-201ENST00000336180 RAB9BQ9NP90 201 aa10.17□□□□□ -0.78
LIMK1-201ENST00000336180 ARL14EPLP0DKL9 152 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 FOLR2P14207 255 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 WDR25Q64LD2 544 aaPredicted RBP10.16□□□□□ -0.78
LIMK1-201ENST00000336180 MRPL36Q9P0J6 103 aaKnown RBP10.16□□□□□ -0.78
LIMK1-201ENST00000336180 AGAP20933 346 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 KIR2DS2P43631 304 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 PPOXP50336 477 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 RPL8P62917 257 aaKnown RBP10.16□□□□□ -0.78
LIMK1-201ENST00000336180 LCN2P80188 198 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 TNXAQ16473 311 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 STPG3Q8N7X2 389 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 NIPSNAP3BQ9BS92 247 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 ACTR3CQ9C0K3 210 aaPredicted RBP10.16□□□□□ -0.78
LIMK1-201ENST00000336180 FBXL15Q9H469 300 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 GAR1Q9NY12 217 aaKnown RBP10.16□□□□□ -0.78
LIMK1-201ENST00000336180 FOXA2Q9Y261 457 aaPredicted RBP10.16□□□□□ -0.78
LIMK1-201ENST00000336180 FCN1O00602 326 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 IL6RP08887 468 aaPredicted RBP10.16□□□□□ -0.78
LIMK1-201ENST00000336180 AREGP15514 252 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 WT1-ASQ06250 92 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 VPS25Q9BRG1 176 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 PRORYQ9H606 182 aa10.16□□□□□ -0.78
LIMK1-201ENST00000336180 IGHV3OR16-10A0A075B7F0 116 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 TGIF2-C20orf24A0A0A6YYL0 155 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 PRSS46E5RG02 174 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 OR10J4P0C629 311 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 STAG3L3P0CL85 134 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 OR10J1P30954 320 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 MBD3L1Q8WWY6 194 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 ADTRPQ96IZ2 230 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 SMIM7Q9BQ49 75 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 INSIG2Q9Y5U4 225 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 USP9YO00507 2555 aaPredicted RBP10.15□□□□□ -0.78
LIMK1-201ENST00000336180 CTXND1A0A1B0GTU2 59 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 CGB1A6NKQ9 187 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 ATP6V1FQ16864 119 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 SP5Q6BEB4 398 aaPredicted RBP10.15□□□□□ -0.78
LIMK1-201ENST00000336180 MIR17HGQ75NE6 70 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 KIR3DL3Q8N743 410 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.15□□□□□ -0.78
LIMK1-201ENST00000336180 UHRF2Q96PU4 802 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 RAB1BQ9H0U4 201 aa10.15□□□□□ -0.78
LIMK1-201ENST00000336180 CXCL1P09341 107 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 PLGLAQ15195 96 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 OR5AN1Q8NGI8 311 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 LINC00574Q9H8X3 128 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 PRNDQ9UKY0 176 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.14□□□□□ -0.791e-6■■■□□ 17.8
LIMK1-201ENST00000336180 TRAV5A0A0B4J249 113 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 A0A0U1RQK1 487 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 C17orf112F2Z3M2 114 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 OPRK1P41145 380 aa10.14□□□□□ -0.79
LIMK1-201ENST00000336180 RPS10P46783 165 aaKnown RBP10.14□□□□□ -0.79
LIMK1-201ENST00000336180 ACOT6Q3I5F7 207 aaPredicted RBP10.14□□□□□ -0.79
LIMK1-201ENST00000336180 KHDC3LQ587J8 217 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms