RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 IAPPP10997 89 aa12.99□□□□□ -0.33
SHOX-201ENST00000334060 WT1-ASQ06250 92 aa12.99□□□□□ -0.33
SHOX-201ENST00000334060 ECSCRQ19T08 205 aa12.99□□□□□ -0.33
SHOX-201ENST00000334060 CBLN2Q8IUK8 224 aa12.99□□□□□ -0.33
SHOX-201ENST00000334060 BAP18Q8IXM2 172 aa12.99□□□□□ -0.33
SHOX-201ENST00000334060 TMEM86BQ8N661 226 aa12.99□□□□□ -0.33
SHOX-201ENST00000334060 COLCA2A8K830 154 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 CNIH1O95406 144 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 ZNF329Q86UD4 541 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.98□□□□□ -0.33
SHOX-201ENST00000334060 ABHD5Q8WTS1 349 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 TREM1Q9NP99 234 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 FOXA2Q9Y261 457 aaPredicted RBP12.98□□□□□ -0.33
SHOX-201ENST00000334060 RCL1Q9Y2P8 373 aaKnown RBP12.98□□□□□ -0.33
SHOX-201ENST00000334060 H0YIZ8 118 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 ADCYAP1P18509 176 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 RAB5CP51148 216 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 RAB32Q13637 225 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 FAM74A1Q5RGS3 127 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 ZNF562Q6V9R5 426 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 ARPC1AQ92747 370 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 RBKSQ9H477 322 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 NDUFA4L2Q9NRX3 87 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 SERTAD4Q9NUC0 356 aa12.98□□□□□ -0.33
SHOX-201ENST00000334060 IGLC7A0M8Q6 106 aa12.97□□□□□ -0.33
SHOX-201ENST00000334060 H3BP45 60 aa12.97□□□□□ -0.33
SHOX-201ENST00000334060 IGHG2P01859 326 aa12.97□□□□□ -0.33
SHOX-201ENST00000334060 CAV2P51636 162 aa12.97□□□□□ -0.33
SHOX-201ENST00000334060 SNRPEP62304 92 aaKnown RBP12.97□□□□□ -0.33
SHOX-201ENST00000334060 MMD2Q8IY49 270 aa12.97□□□□□ -0.33
SHOX-201ENST00000334060 COMMD1Q8N668 190 aa12.97□□□□□ -0.33
SHOX-201ENST00000334060 VSTM2AQ8TAG5 236 aa12.97□□□□□ -0.33
SHOX-201ENST00000334060 TMEM170AQ8WVE7 144 aa12.97□□□□□ -0.33
SHOX-201ENST00000334060 A0A1B0GU03 582 aa12.96□□□□□ -0.33
SHOX-201ENST00000334060 DUXBA0A1W2PPF3 345 aa12.96□□□□□ -0.33
SHOX-201ENST00000334060 IFNA21P01568 189 aa12.96□□□□□ -0.33
SHOX-201ENST00000334060 IFNA17P01571 189 aa12.96□□□□□ -0.33
SHOX-201ENST00000334060 RPL27AP46776 148 aaKnown RBP12.96□□□□□ -0.33
SHOX-201ENST00000334060 MFAP2P55001 183 aa12.96□□□□□ -0.33
SHOX-201ENST00000334060 SLC35E3Q7Z769 313 aa12.96□□□□□ -0.33
SHOX-201ENST00000334060 OR5T1Q8NG75 326 aa12.96□□□□□ -0.33
SHOX-201ENST00000334060 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.96□□□□□ -0.33
SHOX-201ENST00000334060 LSM5Q9Y4Y9 91 aaKnown RBP12.96□□□□□ -0.33
SHOX-201ENST00000334060 TAAR5O14804 337 aa12.96□□□□□ -0.34
SHOX-201ENST00000334060 MDKP21741 143 aaPredicted RBP12.96□□□□□ -0.34
SHOX-201ENST00000334060 TNFRSF9Q07011 255 aa12.96□□□□□ -0.34
SHOX-201ENST00000334060 C2orf50Q96LR7 162 aa12.96□□□□□ -0.34
SHOX-201ENST00000334060 COMMD5Q9GZQ3 224 aa12.96□□□□□ -0.34
SHOX-201ENST00000334060 OR5AC2Q9NZP5 309 aa12.96□□□□□ -0.34
SHOX-201ENST00000334060 HSPB7Q9UBY9 170 aa12.96□□□□□ -0.34
SHOX-201ENST00000334060 SSSCA1O60232 199 aa12.95□□□□□ -0.34
SHOX-201ENST00000334060 S100A10P60903 97 aa12.95□□□□□ -0.34
SHOX-201ENST00000334060 RAB2AP61019 212 aa12.95□□□□□ -0.34
SHOX-201ENST00000334060 HSPE1P61604 102 aaKnown RBP12.95□□□□□ -0.34
SHOX-201ENST00000334060 SCGB2A2Q13296 93 aa12.95□□□□□ -0.34
SHOX-201ENST00000334060 KRTAP24-1Q3LI83 254 aa12.95□□□□□ -0.34
SHOX-201ENST00000334060 AARDQ4LEZ3 155 aa12.95□□□□□ -0.34
SHOX-201ENST00000334060 LBHQ53QV2 105 aaPredicted RBP12.95□□□□□ -0.34
SHOX-201ENST00000334060 C16orf82Q7Z2V1 217 aa12.95□□□□□ -0.34
SHOX-201ENST00000334060 ZNF429Q86V71 674 aa12.95□□□□□ -0.34
SHOX-201ENST00000334060 OR4A5Q8NH83 315 aa12.95□□□□□ -0.34
SHOX-201ENST00000334060 NPFFR1Q9GZQ6 430 aa12.95□□□□□ -0.34
SHOX-201ENST00000334060 PRNDQ9UKY0 176 aa12.95□□□□□ -0.34
SHOX-201ENST00000334060 K7EPK0 472 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 VDAC2P45880 294 aaPredicted RBP12.94□□□□□ -0.34
SHOX-201ENST00000334060 NPBWR1P48145 328 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 PAX9P55771 341 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 ID3Q02535 119 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 C19orf54Q5BKX5 351 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 C11orf44Q8N8P7 122 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 LINC01006Q8NI28 216 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 PPP1R1CQ8WVI7 109 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 SMIM8Q96KF7 97 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 NMES1Q9C002 83 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 S4R3C0 116 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 ACTL6BO94805 426 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 PRCDQ00LT1 54 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 C1QL4Q86Z23 238 aa12.94□□□□□ -0.34
SHOX-201ENST00000334060 IGHV3-21A0A0B4J1V1 117 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 CEBPZOSA8MTT3 80 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 IGHV3-48P01763 117 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 OR13C7P0DN81 318 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 PSMB6P28072 239 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 NKX2-1P43699 371 aaPredicted RBP12.93□□□□□ -0.34
SHOX-201ENST00000334060 KRTAP10-3P60369 221 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 RAB4BP61018 213 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 UNQ5815/PRO19632Q6UWF5 114 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 Q8N2B8 174 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 OR1L8Q8NGR8 309 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 PRSS22Q9GZN4 317 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 KLK15Q9H2R5 256 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 C11orf1Q9H5F2 150 aa12.93□□□□□ -0.34
SHOX-201ENST00000334060 AP4M1O00189 453 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 PET100P0DJ07 73 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 SLC16A13Q7RTY0 426 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 SGMS2Q8NHU3 365 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 C2CD4CQ8TF44 421 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 MS4A10Q96PG2 267 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 OR4C12Q96R67 309 aa12.92□□□□□ -0.34
SHOX-201ENST00000334060 RNF126Q9BV68 326 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms