RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 WFDC3Q8IUB2 231 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 TEX45Q8NA69 505 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 WNT10AQ9GZT5 417 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 A0A087WWC5 75 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 OR5AL1P0C617 328 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 CEACAM8P31997 349 aaPredicted RBP9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 HNRNPA3P51991 378 aaKnown RBP9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 ELOBQ15370 118 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 ZNF585BQ52M93 769 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 TMEM78Q5T7P6 136 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 GPR61Q9BZJ8 451 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 SPRY4Q9C004 299 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 MALRD1Q5VYJ5 2156 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 FAM208BQ5VWN6 2430 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 TEX50A0A1B0GTY4 177 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 IGHV1-8P0DP01 117 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 GCSAMLQ5JQS6 135 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 TREML4Q6UXN2 200 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 GOLT1AQ6ZVE7 132 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 ARPC1AQ92747 370 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 C16orf92Q96LL3 132 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 FOXA2Q9Y261 457 aaPredicted RBP9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 ZNF257Q9Y2Q1 563 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 RFNGQ9Y644 331 aa9.42□□□□□ -0.9
PCDHGC3-201ENST00000308177 TMEM189A5PLL7 270 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 MAS1LP35410 378 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 NHLH1Q02575 133 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 PRSS33Q8NF86 280 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 OR1P1Q8NH06 330 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 MRPL18Q9H0U6 180 aaKnown RBP9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 TUBA4BQ9H853 241 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 ACACBO00763 2458 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 DOCK11Q5JSL3 2073 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 TRAV3A0A0B4J244 114 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 A0A1W2PNU3 283 aaPredicted RBP9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 A0A1W2PS18 150 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 IGLV1-44P01699 117 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 CD24P25063 80 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 ATP5G2Q06055 141 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 ZNF383Q8NA42 475 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 OR10W1Q8NGF6 305 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 C21orf62Q9NYP8 219 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 FAM215AQ9Y5M1 114 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 ST6GALNAC3Q8NDV1 305 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 TIMM23O14925 209 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 RAB9AP51151 201 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 C10orf55Q5SWW7 151 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 SPG11Q96JI7 2443 aa9.41□□□□□ -0.9
PCDHGC3-201ENST00000308177 IGHV2-26A0A0B4J1V2 119 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 TRAV34A0A0B4J273 112 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 FCER1GP30273 86 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 RPL23P62829 140 aaKnown RBP9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 PSG9Q00887 426 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 RPP25LQ8N5L8 163 aaKnown RBP9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 NEUROG1Q92886 237 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 EEF1AKMT3Q96AZ1 226 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 SLC25A33Q9BSK2 321 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 FBXL7Q9UJT9 491 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 YLPM1P49750 1951 aaKnown RBP9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 OR2T8A6NH00 312 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 CDX1P47902 265 aaPredicted RBP9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 TMEM208Q9BTX3 173 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 MUC22E2RYF6 1773 aaPredicted RBP9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 TRAV1-1A0A0B4J248 108 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 PAFAH1B2P68402 229 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 EFNB3Q15768 340 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 LYPD6Q86Y78 171 aa9.4□□□□□ -0.9
PCDHGC3-201ENST00000308177 DOPEY2Q9Y3R5 2298 aa9.4□□□□□ -0.91
PCDHGC3-201ENST00000308177 A1L4Q6 167 aa9.4□□□□□ -0.91
PCDHGC3-201ENST00000308177 E7EQL1 145 aa9.4□□□□□ -0.91
PCDHGC3-201ENST00000308177 NPPCP23582 126 aa9.4□□□□□ -0.91
PCDHGC3-201ENST00000308177 ID1P41134 155 aa9.4□□□□□ -0.91
PCDHGC3-201ENST00000308177 RELBQ01201 579 aa9.4□□□□□ -0.91
PCDHGC3-201ENST00000308177 C3orf36Q3SXR2 165 aa9.4□□□□□ -0.91
PCDHGC3-201ENST00000308177 GGTLC1Q9BX51 225 aa9.4□□□□□ -0.91
PCDHGC3-201ENST00000308177 ADAMTS9Q9P2N4 1935 aa9.4□□□□□ -0.91
PCDHGC3-201ENST00000308177 CACNA1AO00555 2505 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 C1QTNF9BB2RNN3 333 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGHV3-23P01764 117 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 SLC25A48Q6ZT89 311 aaKnown RBP9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 C11orf42Q8N5U0 333 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 TMEM191AQ9H0A3 160 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 TMEM131Q92545 1883 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 A0A087X0M5 115 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 A0A1B0GX30 115 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 CGB1A6NKQ9 187 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 PEX7O00628 323 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 ANOS1P23352 680 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 PGLYRP4Q96LB8 373 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 PTPRSQ13332 1948 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGHV3OR16-13A0A075B7E8 117 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGHV3-74A0A0B4J1X5 117 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 SLC17A3O00476 420 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 GATA4P43694 442 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 RELQ04864 619 aaPredicted RBP9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 KIAA1644Q3SXP7 199 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGFL2Q6UWQ7 119 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 Q8NFD4 153 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 SSC4DQ8WTU2 575 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms