RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 FSTP19883 344 aa6.46□□□□□ -1.37
SCN9A-201ENST00000303354 CNTFRP26992 372 aa6.46□□□□□ -1.37
SCN9A-201ENST00000303354 RND3P61587 244 aa6.46□□□□□ -1.37
SCN9A-201ENST00000303354 MLANAQ16655 118 aa6.46□□□□□ -1.37
SCN9A-201ENST00000303354 PIKFYVEQ9Y2I7 2098 aa6.46□□□□□ -1.37
SCN9A-201ENST00000303354 OR10J3Q5JRS4 329 aa6.46□□□□□ -1.37
SCN9A-201ENST00000303354 SIGLEC15Q6ZMC9 328 aa6.46□□□□□ -1.37
SCN9A-201ENST00000303354 LY75O60449 1722 aa6.46□□□□□ -1.37
SCN9A-201ENST00000303354 TCF21O43680 179 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 TMEM249Q2WGJ8 235 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 VAX1Q5SQQ9 334 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 PDCD11Q14690 1871 aaKnown RBP6.46□□□□□ -1.38
SCN9A-201ENST00000303354 TRAV3A0A0B4J244 114 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.46□□□□□ -1.38
SCN9A-201ENST00000303354 TMEM50AO95807 157 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 FAM90A1Q86YD7 464 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 C2orf88Q9BSF0 95 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 PTPRZ1P23471 2315 aaPredicted RBP6.46□□□□□ -1.38
SCN9A-201ENST00000303354 B4DSR2 109 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 TMEM95Q3KNT9 176 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 RNF144BQ7Z419 303 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 FAM19A2Q8N3H0 131 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 OR11H4Q8NGC9 324 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 TAF1LQ8IZX4 1826 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 NDUFS7O75251 213 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 A0A087X0M5 115 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 A0A1B0GX30 115 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 TM4SF5O14894 197 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 ERCC8Q13216 396 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 TCF23Q7RTU1 214 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 H1FOOQ8IZA3 346 aaPredicted RBP6.46□□□□□ -1.38
SCN9A-201ENST00000303354 MIA3Q5JRA6 1907 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 PNRC1Q12796 327 aaPredicted RBP6.46□□□□□ -1.38
SCN9A-201ENST00000303354 SAXO1Q8IYX7 474 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 FAM131CQ96AQ9 280 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 PRELID3AQ96N28 172 aa6.46□□□□□ -1.38
SCN9A-201ENST00000303354 TRAF4Q9BUZ4 470 aaPredicted RBP6.46□□□□□ -1.38
SCN9A-201ENST00000303354 TMEM127O75204 238 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 CR1LQ2VPA4 569 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 FLVCR1-AS1Q8TAF5 88 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 XCL2Q9UBD3 114 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 DMRT1Q9Y5R6 373 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 PGPEP1LA6NFU8 196 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 COL5A3P25940 1745 aaPredicted RBP6.45□□□□□ -1.38
SCN9A-201ENST00000303354 DUX4L9Q6RFH8 374 aaPredicted RBP6.45□□□□□ -1.38
SCN9A-201ENST00000303354 CD177Q8N6Q3 437 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 NXT2Q9NPJ8 142 aaKnown RBP6.45□□□□□ -1.38
SCN9A-201ENST00000303354 CA7P43166 264 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 C15orf32Q32M92 178 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 SFRP2Q96HF1 295 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 NPCDR1Q9BY65 106 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 COL5A1-AS1Q5SY13 56 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 TMEM178BH3BS89 294 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 CA1P00915 261 aaPredicted RBP6.45□□□□□ -1.38
SCN9A-201ENST00000303354 TYMSP04818 313 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 GRNP28799 593 aaKnown RBP6.45□□□□□ -1.38
SCN9A-201ENST00000303354 C2orf68Q2NKX9 166 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 TMEM183AQ8IXX5 376 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 EXOC3-AS1Q8N2X6 119 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 PCM1Q15154 2024 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 K7ENP7 123 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 CLPSP04118 112 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 SEC11BP0C7V7 166 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 TMEM14DPA8MWL7 114 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 FER1L6-AS1Q8NA97 138 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 ALKBH7Q9BT30 221 aaPredicted RBP6.45□□□□□ -1.38
SCN9A-201ENST00000303354 SCRT1Q9BWW7 348 aa6.45□□□□□ -1.38
SCN9A-201ENST00000303354 ELOA3CA0A087WX78 387 aaPredicted RBP6.44□□□□□ -1.38
SCN9A-201ENST00000303354 F8VVB4 439 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 F8VWA3 439 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 CD8AP01732 235 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 AGAP20933 346 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 GGNQ86UU5 652 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 TTC9CQ8N5M4 171 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 SHISA3A0PJX4 238 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 DPRXA6NFQ7 191 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 UPK2O00526 184 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 CFDP00746 253 aaPredicted RBP6.44□□□□□ -1.38
SCN9A-201ENST00000303354 SAA4P35542 130 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 LINC00158P58513 81 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 IFITM3Q01628 133 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 TPTE2P1Q5T6R2 138 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 RFNGQ9Y644 331 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 COX6CP09669 75 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 LEPP41159 167 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 H2BFSP57053 126 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 FAM169BQ8N8A8 192 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 CKAP5Q14008 2032 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 IGHV1-3A0A0C4DH29 117 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 IGLV3-19P01714 112 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 A0A087WX48 190 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 TBX6O95947 436 aaPredicted RBP6.44□□□□□ -1.38
SCN9A-201ENST00000303354 CLPSL2Q6UWE3 100 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 TRAV2A0A0B4J234 112 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 F5H768 121 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 HOXA3O43365 443 aaPredicted RBP6.44□□□□□ -1.38
SCN9A-201ENST00000303354 IL18BPO95998 194 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 FAM120AOSQ5T036 256 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 HIST2H2BDQ6DRA6 164 aa6.44□□□□□ -1.38
SCN9A-201ENST00000303354 C14orf144Q96I85 54 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms