RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 FOXL1Q12952 345 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 SPANXN5Q5MJ07 72 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 TEX38Q6PEX7 206 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 ZNF491Q8N8L2 437 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 OR2T35Q8NGX2 323 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 HIPK2Q9H2X6 1198 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 LYRM2Q9NU23 88 aaPredicted RBP7.36□□□□□ -1.23
RFX3-201ENST00000302303 PSENENQ9NZ42 101 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 MBD2Q9UBB5 411 aa7.36□□□□□ -1.23
RFX3-201ENST00000302303 A0A1B0GUS0 222 aa7.35□□□□□ -1.23
RFX3-201ENST00000302303 MFSD2BA6NFX1 497 aa7.35□□□□□ -1.23
RFX3-201ENST00000302303 OR2J3O76001 311 aa7.35□□□□□ -1.23
RFX3-201ENST00000302303 PF4V1P10720 104 aa7.35□□□□□ -1.23
RFX3-201ENST00000302303 SNCAP37840 140 aa7.35□□□□□ -1.23
RFX3-201ENST00000302303 RHOGP84095 191 aa7.35□□□□□ -1.23
RFX3-201ENST00000302303 ARSJQ5FYB0 599 aaPredicted RBP7.35□□□□□ -1.23
RFX3-201ENST00000302303 SLC25A24Q6NUK1 477 aa7.35□□□□□ -1.23
RFX3-201ENST00000302303 TCTE3Q8IZS6 198 aa7.35□□□□□ -1.23
RFX3-201ENST00000302303 TMEM252Q8N6L7 170 aa7.35□□□□□ -1.23
RFX3-201ENST00000302303 C11orf44Q8N8P7 122 aa7.35□□□□□ -1.23
RFX3-201ENST00000302303 CIB3Q96Q77 187 aaPredicted RBP7.35□□□□□ -1.23
RFX3-201ENST00000302303 CITED2Q99967 270 aaPredicted RBP7.35□□□□□ -1.23
RFX3-201ENST00000302303 GON7Q9BXV9 100 aa7.35□□□□□ -1.23
RFX3-201ENST00000302303 IGHV3-21A0A0B4J1V1 117 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 RNF222A6NCQ9 220 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 E5RGE8 158 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 IFNA10P01566 189 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 IGHV3-48P01763 117 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 TRGV3P03979 118 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 METTL15P1P0C7V9 234 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 P2RY1P47900 373 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 ATP5IP56385 69 aaPredicted RBP7.34□□□□□ -1.23
RFX3-201ENST00000302303 SLC35B1P78383 322 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 NHLH2Q02577 135 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 COMMD1Q8N668 190 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 NECAP1Q8NC96 275 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 SCARB1Q8WTV0 552 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 CCDC140Q96MF4 163 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 CITED1Q99966 193 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 KRTAP3-3Q9BYR6 98 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 SLA2Q9H6Q3 261 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 GNB4Q9HAV0 340 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 ENY2Q9NPA8 101 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 ZFP57Q9NU63 452 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 FBXL7Q9UJT9 491 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 S4R3C0 116 aa7.34□□□□□ -1.23
RFX3-201ENST00000302303 COL6A5A8TX70 2615 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 I3L521 148 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 LY86O95711 162 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 MT-CO2P00403 227 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 DEFA4P12838 97 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 CDX1P47902 265 aaPredicted RBP7.33□□□□□ -1.24
RFX3-201ENST00000302303 RPL23AP62750 156 aaKnown RBP7.33□□□□□ -1.24
RFX3-201ENST00000302303 C15orf32Q32M92 178 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 ZNF343Q6P1L6 599 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 TMEM65Q6PI78 240 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 ETV3LQ6ZN32 361 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 RNASEH2CQ8TDP1 164 aaKnown RBP7.33□□□□□ -1.24
RFX3-201ENST00000302303 TMEM158Q8WZ71 300 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 ZNF355PQ9NSJ1 428 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 TNFSF18Q9UNG2 199 aa7.33□□□□□ -1.24
RFX3-201ENST00000302303 STRAPQ9Y3F4 350 aaKnown RBP7.33□□□□□ -1.24
RFX3-201ENST00000302303 IGKV1OR2-108A0A075B7D4 117 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 FAM223BA6NKX1 122 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 CST7O76096 145 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 TRBV12-3P01733 135 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 IGHV3-23P01764 117 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 RLN2P04090 185 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 HIST1H1BP16401 226 aaKnown RBP7.32□□□□□ -1.24
RFX3-201ENST00000302303 SUB1P53999 127 aaKnown RBP eCLIP7.32□□□□□ -1.24
RFX3-201ENST00000302303 TPPP2P59282 170 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 EWSR1Q01844 656 aaKnown RBP eCLIP7.32□□□□□ -1.24
RFX3-201ENST00000302303 CD69Q07108 199 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 FGL1Q08830 312 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 GAMTQ14353 236 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 AKAP14Q86UN6 197 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 FAM223AQ8IWN6 122 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 MRPL41Q8IXM3 137 aaKnown RBP7.32□□□□□ -1.24
RFX3-201ENST00000302303 OR1L6Q8NGR2 347 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 ZNF502Q8TBZ5 544 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 VN1R17PQ8TDU5 208 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 MISP3Q96FF7 219 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 USMG5Q96IX5 58 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 UBE2E2Q96LR5 201 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 AQP10Q96PS8 301 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 IGKV1D-37A0A075B6S9 117 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 L7N2F9 121 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 IGHV3-11P01762 117 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 C1QBP02746 253 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 PVALBP20472 110 aaPredicted RBP7.32□□□□□ -1.24
RFX3-201ENST00000302303 RPL12P30050 165 aaKnown RBP7.32□□□□□ -1.24
RFX3-201ENST00000302303 FCGR2BP31994 310 aaPredicted RBP7.32□□□□□ -1.24
RFX3-201ENST00000302303 GPX4P36969 197 aaPredicted RBP7.32□□□□□ -1.24
RFX3-201ENST00000302303 SULT1A1P50225 295 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 CAV2P51636 162 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 RIPPLY3P57055 190 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 VAMP2P63027 116 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 ZNF546Q86UE3 836 aa7.32□□□□□ -1.24
RFX3-201ENST00000302303 TMEM116Q8NCL8 245 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms