RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 GNG7O60262 68 aa11.21□□□□□ -0.61
SOD1-201ENST00000270142 RCVRNP35243 200 aa11.21□□□□□ -0.61
SOD1-201ENST00000270142 UCP3P55916 312 aa11.21□□□□□ -0.61
SOD1-201ENST00000270142 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
SOD1-201ENST00000270142 IZUMO4Q1ZYL8 232 aa11.21□□□□□ -0.61
SOD1-201ENST00000270142 SPINK9Q5DT21 86 aa11.21□□□□□ -0.61
SOD1-201ENST00000270142 RPP25LQ8N5L8 163 aaKnown RBP11.21□□□□□ -0.61
SOD1-201ENST00000270142 SCPEP1Q9HB40 452 aa11.21□□□□□ -0.61
SOD1-201ENST00000270142 MPTX1A8MV57 137 aa11.2□□□□□ -0.62
SOD1-201ENST00000270142 APOHP02749 345 aaPredicted RBP11.2□□□□□ -0.62
SOD1-201ENST00000270142 CMC4P56277 68 aaPredicted RBP11.2□□□□□ -0.62
SOD1-201ENST00000270142 ERHP84090 104 aaKnown RBP11.2□□□□□ -0.62
SOD1-201ENST00000270142 TOMM20LQ6UXN7 152 aa11.2□□□□□ -0.62
SOD1-201ENST00000270142 TCF24Q7RTU0 167 aa11.2□□□□□ -0.62
SOD1-201ENST00000270142 GATAD1Q8WUU5 269 aa11.2□□□□□ -0.62
SOD1-201ENST00000270142 ST8SIA2Q92186 375 aa11.2□□□□□ -0.62
SOD1-201ENST00000270142 CMTM3Q96MX0 182 aa11.2□□□□□ -0.62
SOD1-201ENST00000270142 RARRES2Q99969 163 aa11.2□□□□□ -0.62
SOD1-201ENST00000270142 DNAH6Q9C0G6 4158 aa11.2□□□□□ -0.62
SOD1-201ENST00000270142 M0QYG6 137 aa11.19□□□□□ -0.62
SOD1-201ENST00000270142 DEDDO75618 318 aa11.19□□□□□ -0.62
SOD1-201ENST00000270142 APOA1P02647 267 aa11.19□□□□□ -0.62
SOD1-201ENST00000270142 NCS1P62166 190 aa11.19□□□□□ -0.62
SOD1-201ENST00000270142 LILRB2Q8N423 598 aa11.19□□□□□ -0.62
SOD1-201ENST00000270142 GINS3Q9BRX5 216 aa11.19□□□□□ -0.62
SOD1-201ENST00000270142 VSIRQ9H7M9 311 aa11.19□□□□□ -0.62
SOD1-201ENST00000270142 A0A087WXM4 84 aa11.18□□□□□ -0.62
SOD1-201ENST00000270142 IGHV3-66A0A0C4DH42 116 aa11.18□□□□□ -0.62
SOD1-201ENST00000270142 SMIM31A0A1B0GVY4 71 aa11.18□□□□□ -0.62
SOD1-201ENST00000270142 ST8SIA3O43173 380 aa11.18□□□□□ -0.62
SOD1-201ENST00000270142 IGKV1-5P01602 117 aa11.18□□□□□ -0.62
SOD1-201ENST00000270142 ELK1P19419 428 aa11.18□□□□□ -0.62
SOD1-201ENST00000270142 NANOS2P60321 138 aaKnown RBP11.18□□□□□ -0.62
SOD1-201ENST00000270142 RNASE12Q5GAN4 147 aaKnown RBP11.18□□□□□ -0.62
SOD1-201ENST00000270142 FAM24BQ8N5W8 94 aa11.18□□□□□ -0.62
SOD1-201ENST00000270142 OR11H2Q8NH07 326 aa11.18□□□□□ -0.62
SOD1-201ENST00000270142 C11orf68Q9H3H3 251 aaKnown RBP11.18□□□□□ -0.62
SOD1-201ENST00000270142 ZFAND3Q9H8U3 227 aa11.18□□□□□ -0.62
SOD1-201ENST00000270142 VCX3AQ9NNX9 186 aa11.18□□□□□ -0.62
SOD1-201ENST00000270142 PUS1Q9Y606 427 aaKnown RBP eCLIP11.18□□□□□ -0.62
SOD1-201ENST00000270142 HPGDSO60760 199 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 DFFBO76075 338 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 CA1P00915 261 aaPredicted RBP11.17□□□□□ -0.62
SOD1-201ENST00000270142 P0C879 139 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 PGAM2P15259 253 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 PI3P19957 117 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 NPBWR1P48145 328 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 DEFB131AP59861 70 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 RND3P61587 244 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 VBP1P61758 197 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 PAFAH1B2P68402 229 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 LEMD1Q68G75 181 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 LGALS9CQ6DKI2 356 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 SLC35G3Q8N808 338 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 DUSP18Q8NEJ0 188 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 TP53RKQ96S44 253 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 MS4A6AQ9H2W1 248 aa11.17□□□□□ -0.62
SOD1-201ENST00000270142 A0A0B4J293 547 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 A0A1B0GU03 582 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 INS-IGF2F8WCM5 200 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 TMEM50AO95807 157 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 CD5P06127 495 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 PIGPP57054 158 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 PVRIGQ6DKI7 326 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 ZNF600Q6ZNG1 722 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 LHFPL1Q86WI0 220 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 FUNDC2Q9BWH2 189 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 FBXL17Q9UF56 701 aa11.16□□□□□ -0.62
SOD1-201ENST00000270142 DNASE2O00115 360 aaPredicted RBP11.15□□□□□ -0.62
SOD1-201ENST00000270142 DEFB4AO15263 64 aa11.15□□□□□ -0.62
SOD1-201ENST00000270142 TNFAIP8O95379 198 aa11.15□□□□□ -0.62
SOD1-201ENST00000270142 IFNA17P01571 189 aa11.15□□□□□ -0.62
SOD1-201ENST00000270142 RNASE2P10153 161 aaKnown RBP11.15□□□□□ -0.62
SOD1-201ENST00000270142 AKR1C2P52895 323 aa11.15□□□□□ -0.62
SOD1-201ENST00000270142 ZNF486Q96H40 463 aaPredicted RBP11.15□□□□□ -0.62
SOD1-201ENST00000270142 MFFQ9GZY8 342 aa11.15□□□□□ -0.62
SOD1-201ENST00000270142 MRPL36Q9P0J6 103 aaKnown RBP11.15□□□□□ -0.62
SOD1-201ENST00000270142 KLK11Q9UBX7 282 aa11.15□□□□□ -0.62
SOD1-201ENST00000270142 HERC2O95714 4834 aa11.14□□□□□ -0.63
SOD1-201ENST00000270142 TRAV2A0A0B4J234 112 aa11.14□□□□□ -0.63
SOD1-201ENST00000270142 A0A0G2JRQ6 117 aa11.14□□□□□ -0.63
SOD1-201ENST00000270142 C3orf85A0A1B0GTC6 90 aa11.14□□□□□ -0.63
SOD1-201ENST00000270142 FAM25AB3EWG3 89 aa11.14□□□□□ -0.63
SOD1-201ENST00000270142 FAM25CB3EWG5 89 aa11.14□□□□□ -0.63
SOD1-201ENST00000270142 FAM25GB3EWG6 89 aa11.14□□□□□ -0.63
SOD1-201ENST00000270142 CD3DP04234 171 aa11.14□□□□□ -0.63
SOD1-201ENST00000270142 SNCAP37840 140 aa11.14□□□□□ -0.63
SOD1-201ENST00000270142 HOXA1P49639 335 aaPredicted RBP11.14□□□□□ -0.63
SOD1-201ENST00000270142 PPP5CP53041 499 aa11.14□□□□□ -0.63
SOD1-201ENST00000270142 RPL11P62913 178 aaKnown RBP11.14□□□□□ -0.63
SOD1-201ENST00000270142 TMEM187Q14656 261 aa11.14□□□□□ -0.63
SOD1-201ENST00000270142 RBMS2Q15434 407 aaKnown RBP11.14□□□□□ -0.63
SOD1-201ENST00000270142 RNASE10Q5GAN6 216 aaKnown RBP11.14□□□□□ -0.63
SOD1-201ENST00000270142 FNDC4Q9H6D8 234 aaPredicted RBP11.14□□□□□ -0.63
SOD1-201ENST00000270142 CORTO00230 105 aa11.13□□□□□ -0.63
SOD1-201ENST00000270142 ETV6P41212 452 aa11.13□□□□□ -0.63
SOD1-201ENST00000270142 RORCP51449 518 aa11.13□□□□□ -0.63
SOD1-201ENST00000270142 MLANAQ16655 118 aa11.13□□□□□ -0.63
SOD1-201ENST00000270142 TRIM16LQ309B1 348 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms