RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ETV3LQ6ZN32 361 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 Q6ZSV7 163 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 KCNRGQ8N5I3 272 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 TTC9CQ8N5M4 171 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 OR5C1Q8NGR4 320 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 PINX1Q96BK5 328 aaKnown RBP7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 MISP3Q96FF7 219 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 MS4A10Q96PG2 267 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 NPFFR1Q9GZQ6 430 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 SLC25A31Q9H0C2 315 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 ZNF355PQ9NSJ1 428 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 FBXL17Q9UF56 701 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 F11RQ9Y624 299 aaKnown RBP7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 S4R3C0 116 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 PRSS46E5RG02 174 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 CLDN34H7C241 214 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 IGF1P05019 195 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 CRYGCP07315 174 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 DEFA4P12838 97 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 RPP30P78346 268 aaKnown RBP7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 SLC38A11Q08AI6 406 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 OR2F1Q13607 317 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 AKIRIN2Q53H80 203 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 C19orf54Q5BKX5 351 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 LCNL1Q6ZST4 164 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 ZNF329Q86UD4 541 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 STX12Q86Y82 276 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 FANCD2OSQ96PS1 177 aa7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 SRSF8Q9BRL6 282 aaKnown RBP7.63□□□□□ -1.19
SNRNP40-201ENST00000263694 C2CD3Q4AC94 2353 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 A0A0D9SG52 128 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 NPIPB5A8MRT5 1133 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 AP4M1O00189 453 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 S100A11P31949 105 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 CRIP2P52943 208 aaPredicted RBP7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 SUB1P53999 127 aaKnown RBP eCLIP7.62□□□□□ -1.193e-10■■■□□ 14.8
SNRNP40-201ENST00000263694 RAB11AP62491 216 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 OPCMLQ14982 345 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 HIST2H2BDQ6DRA6 164 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 HSD17B13Q7Z5P4 300 aaPredicted RBP7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 MRPL41Q8IXM3 137 aaKnown RBP7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 STPG2Q8N412 459 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 ZNF114Q8NC26 417 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 OR10P1Q8NGE3 313 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 OR1P1Q8NH06 330 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 OR2T6Q8NHC8 308 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 FAM110DQ8TAY7 271 aaPredicted RBP7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 FNDC4Q9H6D8 234 aaPredicted RBP7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 CYTL1Q9NRR1 136 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 SERTAD4Q9NUC0 356 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 MRPL36Q9P0J6 103 aaKnown RBP7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 RFNGQ9Y644 331 aa7.62□□□□□ -1.19
SNRNP40-201ENST00000263694 TCF21O43680 179 aa7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 OR2J3O76001 311 aa7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 NDUFB8O95169 186 aa7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 LY86O95711 162 aa7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 IGHV3-23P01764 117 aa7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 CRYBA1P05813 215 aa7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 PPIFP30405 207 aaKnown RBP7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 ZNF345Q14585 488 aa7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 RPL7L1Q6DKI1 246 aaKnown RBP7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 PVRIGQ6DKI7 326 aa7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 OR1S2Q8NGQ3 325 aa7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 KLK15Q9H2R5 256 aa7.61□□□□□ -1.19
SNRNP40-201ENST00000263694 IGLV11-55A0A075B6I3 123 aa7.6□□□□□ -1.19
SNRNP40-201ENST00000263694 SMCO3A2RU48 225 aa7.6□□□□□ -1.19
SNRNP40-201ENST00000263694 BCL2L11O43521 198 aa7.6□□□□□ -1.19
SNRNP40-201ENST00000263694 MT-CO2P00403 227 aa7.6□□□□□ -1.19
SNRNP40-201ENST00000263694 OPRK1P41145 380 aa7.6□□□□□ -1.19
SNRNP40-201ENST00000263694 CFHR3Q02985 330 aa7.6□□□□□ -1.19
SNRNP40-201ENST00000263694 BAXQ07812 192 aa7.6□□□□□ -1.19
SNRNP40-201ENST00000263694 Q8N2B8 174 aa7.6□□□□□ -1.19
SNRNP40-201ENST00000263694 LILRB2Q8N423 598 aa7.6□□□□□ -1.19
SNRNP40-201ENST00000263694 JMJD8Q96S16 334 aa7.6□□□□□ -1.19
SNRNP40-201ENST00000263694 ARPC5LQ9BPX5 153 aa7.6□□□□□ -1.19
SNRNP40-201ENST00000263694 UBE2L5PA0A1B0GUS4 154 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 KANTRA0A1W2PQU2 76 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 MFSD2BA6NFX1 497 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 I3L2K1 104 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 K7EIM0 57 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 TSPAN9O75954 239 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 PF4V1P10720 104 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 HBG1P69891 147 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 HBG2P69892 147 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 CD69Q07108 199 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 GAMTQ14353 236 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 ACY3Q96HD9 319 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 TMEM68Q96MH6 324 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 ATP5SQ99766 215 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 ZNF471Q9BX82 626 aaPredicted RBP7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 FBXL7Q9UJT9 491 aa7.59□□□□□ -1.19
SNRNP40-201ENST00000263694 TRBV9A0A0B4J1U6 114 aa7.59□□□□□ -1.2
SNRNP40-201ENST00000263694 TRGV3P03979 118 aa7.59□□□□□ -1.2
SNRNP40-201ENST00000263694 ATP5IP56385 69 aaPredicted RBP7.59□□□□□ -1.2
SNRNP40-201ENST00000263694 DLK1P80370 383 aa7.59□□□□□ -1.2
SNRNP40-201ENST00000263694 RHOGP84095 191 aa7.59□□□□□ -1.2
SNRNP40-201ENST00000263694 SLC16A13Q7RTY0 426 aa7.59□□□□□ -1.2
SNRNP40-201ENST00000263694 CENPVQ7Z7K6 275 aaPredicted RBP7.59□□□□□ -1.2
SNRNP40-201ENST00000263694 LINC01006Q8NI28 216 aa7.59□□□□□ -1.2
SNRNP40-201ENST00000263694 RNASEH2CQ8TDP1 164 aaKnown RBP7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms