RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PLP1P60201 277 aa13.19□□□□□ -0.3
PRPF40B-201ENST00000261897 RAB30Q15771 203 aa13.19□□□□□ -0.3
PRPF40B-201ENST00000261897 BHLHA15Q7RTS1 189 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-201ENST00000261897 ZNRF1Q8ND25 227 aa13.19□□□□□ -0.3
PRPF40B-201ENST00000261897 LRRC29Q8WV35 223 aa13.19□□□□□ -0.3
PRPF40B-201ENST00000261897 TWSG1Q9GZX9 223 aa13.19□□□□□ -0.3
PRPF40B-201ENST00000261897 TRAV30A0A087WSZ9 112 aa13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 IGHV1-45A0A0A0MS14 117 aa13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 IGHV2-70DA0A0C4DH43 119 aa13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 C12orf54Q6X4T0 127 aa13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 MED13Q9UHV7 2174 aa13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 J3QR06 171 aa13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 ARF6P62330 175 aa13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 CENPVQ7Z7K6 275 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 GGNQ86UU5 652 aa13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 SH3BGRL2Q9UJC5 107 aa13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 SP5Q6BEB4 398 aaPredicted RBP13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 FOXL2NBQ6ZUU3 175 aa13.18□□□□□ -0.3
PRPF40B-201ENST00000261897 ZNF207O43670 478 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 DCAF12Q5T6F0 453 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 GTSF1LQ9H1H1 148 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 CPAMD8Q8IZJ3 1885 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 COX6A1P12074 109 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 OR10J3Q5JRS4 329 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 RIPPLY2Q5TAB7 128 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 OR2V2Q96R30 315 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 SFXN3Q9BWM7 321 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 HCFC1P51610 2035 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 IGLV3-32A0A0A0MS00 114 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 TRBV9A0A0B4J1U6 114 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 REG1AP05451 166 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 Q6P435 159 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 FA2HQ7L5A8 372 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 TNFRSF19Q9NS68 423 aa13.17□□□□□ -0.3
PRPF40B-201ENST00000261897 RIF1Q5UIP0 2472 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 ENSAO43768 121 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 MPDU1O75352 247 aa13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 SPACA3Q8IXA5 215 aa13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 OR1B1Q8NGR6 318 aa13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 POM121L2Q96KW2 1035 aa13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 IGHV2-26A0A0B4J1V2 119 aa13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 TRAV8-6A0A0B4J262 113 aa13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 IGLC7A0M8Q6 106 aa13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 ISLRO14498 428 aa13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 HIST1H1EP10412 219 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 SNRNP40Q96DI7 357 aaKnown RBP13.16□□□□□ -0.3
PRPF40B-201ENST00000261897 TMEM238C9JI98 176 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 TMEM177Q53S58 311 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 NEUROG1Q92886 237 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 COMMD5Q9GZQ3 224 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 MRPS16Q9Y3D3 137 aaKnown RBP13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 RTL8BQ17RB0 113 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 MTURNQ8N3F0 131 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 NUP35Q8NFH5 326 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 OR1N2Q8NGR9 330 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 C5orf30Q96GV9 206 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 PROK2Q9HC23 129 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 DSCAML1Q8TD84 2053 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 NOTCH3Q9UM47 2321 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 PGPA6NDG6 321 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 GGTLC3B5MD39 225 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 Q8IYB0 196 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 SARAFQ96BY9 339 aa13.15□□□□□ -0.3
PRPF40B-201ENST00000261897 A0A1W2PRE2 83 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 P01737 135 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 COL8A1P27658 744 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 EPHA8P29322 1005 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 Q6ZS49 121 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 MRPL52Q86TS9 123 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 TEX45Q8NA69 505 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 OR10W1Q8NGF6 305 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 ZNRD1Q9P1U0 126 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 OR51B2Q9Y5P1 312 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 LOC102723996A0A087X1L8 192 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 PMS2P5A8MQ11 134 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 CTRLP40313 264 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 WFDC12Q8WWY7 111 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 TXNDC17Q9BRA2 123 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 THYN1Q9P016 225 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 PEF1Q9UBV8 284 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 APC2O95996 2303 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 IGLV3-12A0A075B6K2 115 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 FAM231BA6NCW3 169 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 SPRY3O43610 288 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 GPR183P32249 361 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 CLDN18P56856 261 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 TBR1Q16650 682 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 WDR86Q86TI4 376 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 PAXXQ9BUH6 204 aa13.14□□□□□ -0.31
PRPF40B-201ENST00000261897 GFRA3O60609 400 aa13.13□□□□□ -0.31
PRPF40B-201ENST00000261897 GCSHP23434 173 aa13.13□□□□□ -0.31
PRPF40B-201ENST00000261897 MPV17P39210 176 aa13.13□□□□□ -0.31
PRPF40B-201ENST00000261897 SMIM21Q3B7S5 101 aa13.13□□□□□ -0.31
PRPF40B-201ENST00000261897 TRGV10A0A0A0MS01 117 aa13.13□□□□□ -0.31
PRPF40B-201ENST00000261897 PATE3B3GLJ2 98 aa13.13□□□□□ -0.31
PRPF40B-201ENST00000261897 MOSP00540 346 aa13.13□□□□□ -0.31
PRPF40B-201ENST00000261897 PRSS57Q6UWY2 283 aa13.13□□□□□ -0.31
PRPF40B-201ENST00000261897 CREBBPQ92793 2442 aa13.13□□□□□ -0.31
PRPF40B-201ENST00000261897 SMIM12Q96EX1 92 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms