RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 HOXB1P14653 301 aaPredicted RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 MBNL2Q5VZF2 373 aaKnown RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 PHLDA3Q9Y5J5 127 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 FBLL1A6NHQ2 334 aaKnown RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 LINC00473A8K010 186 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 UPK2O00526 184 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 IGKV1-16P04430 117 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 RRN3P1Q2M238 152 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 OR1N2Q8NGR9 330 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 IGKV1D-17A0A075B6S4 117 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 NBEAP1P0C6P0 100 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 SRSF9Q13242 221 aaKnown RBP eCLIP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 ZNF506Q5JVG8 444 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 WFDC11Q8NEX6 87 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 OR52E5Q8NH55 327 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 GGACTQ9BVM4 153 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 YTHDF2Q9Y5A9 579 aaKnown RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 DUTP33316 252 aaKnown RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 IFI27L2Q9H2X8 130 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 TBL2Q9Y4P3 447 aaKnown RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 CA1P00915 261 aaPredicted RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 SOD3P08294 240 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 GZMBP10144 247 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 NTF4P34130 210 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 RPL23P62829 140 aaKnown RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 GPR82Q96P67 336 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 SMDT1Q9H4I9 107 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 PRRC2BQ5JSZ5 2229 aaKnown RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 DNLZQ5SXM8 178 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 PPP1R27Q86WC6 154 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 PROK2Q9HC23 129 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 SMIM6P0DI80 62 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 HIST1H1AQ02539 215 aaPredicted RBP3.88□□□□□ -1.79
RAP1B-201ENST00000250559 LCNL1Q6ZST4 164 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 IFNL4K9M1U5 179 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 TM4SF5O14894 197 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 IL36BQ9NZH7 164 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 HERPUD1Q15011 391 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 CYYR1Q96J86 154 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 Q9H3A6 140 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 PLXNA3P51805 1871 aa3.88□□□□□ -1.79
RAP1B-201ENST00000250559 M0R381 172 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 MDS2Q8NDY4 140 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 TMEM191AQ9H0A3 160 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 IGFL4Q6B9Z1 124 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 EBLN2Q6P2I7 272 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 CLDN16Q9Y5I7 305 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 PDE4DIPQ5VU43 2346 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 UBE2L6O14933 153 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 ZNF324O75467 553 aaPredicted RBP3.87□□□□□ -1.79
RAP1B-201ENST00000250559 TRGV3P03979 118 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 EVI2AP22794 236 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 RPL15P61313 204 aaKnown RBP3.87□□□□□ -1.79
RAP1B-201ENST00000250559 ERVK11-1P61568 191 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 ZNF56Q15929 161 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 MLANAQ16655 118 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 FBLN7Q53RD9 439 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 ZNF474Q6S9Z5 364 aaPredicted RBP3.87□□□□□ -1.79
RAP1B-201ENST00000250559 MGST2Q99735 147 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 MYO7AQ13402 2215 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 DIAPH2-AS1Q14236 149 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 OSR1Q8TAX0 266 aaPredicted RBP3.87□□□□□ -1.79
RAP1B-201ENST00000250559 COQ2Q96H96 371 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 DPM3Q9P2X0 92 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 NPIPB11E5RHQ5 1161 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 YPEL1O60688 119 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 YPEL2Q96QA6 119 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 NBR2O15453 112 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 THBDP07204 575 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 RNASE4P34096 147 aaKnown RBP3.87□□□□□ -1.79
RAP1B-201ENST00000250559 LHFPL1Q86WI0 220 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 ST6GALNAC3Q8NDV1 305 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 ZNF98A6NK75 572 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 M0R2N4 97 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 ZNF672Q499Z4 452 aaPredicted RBP3.87□□□□□ -1.79
RAP1B-201ENST00000250559 VKORC1Q9BQB6 163 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 BET1LQ9NYM9 111 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 ZMAT5Q9UDW3 170 aaKnown RBP3.87□□□□□ -1.79
RAP1B-201ENST00000250559 ZFP30Q9Y2G7 519 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 GCSHP23434 173 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 UBE2E2Q96LR5 201 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 MRPL32Q9BYC8 188 aaKnown RBP3.87□□□□□ -1.79
RAP1B-201ENST00000250559 A8MXK9 166 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 GFI1BQ5VTD9 330 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 TREML4Q6UXN2 200 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 ST6GALNAC6Q969X2 333 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 AJUBAQ96IF1 538 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 SLC25A15Q9Y619 301 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 C9JCJ5 164 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 DEFB113Q30KQ7 82 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 REG4Q9BYZ8 158 aa3.87□□□□□ -1.79
RAP1B-201ENST00000250559 SRRM5B3KS81 715 aa3.86□□□□□ -1.79
RAP1B-201ENST00000250559 M0R143 59 aa3.86□□□□□ -1.79
RAP1B-201ENST00000250559 NUDT3O95989 172 aa3.86□□□□□ -1.79
RAP1B-201ENST00000250559 CDX1P47902 265 aaPredicted RBP3.86□□□□□ -1.79
RAP1B-201ENST00000250559 DNM1P46Q6ZS02 220 aa3.86□□□□□ -1.79
RAP1B-201ENST00000250559 PIP4P1Q86T03 277 aa3.86□□□□□ -1.79
RAP1B-201ENST00000250559 SCRT1Q9BWW7 348 aa3.86□□□□□ -1.79
RAP1B-201ENST00000250559 IGKV1-5P01602 117 aa3.86□□□□□ -1.79
RAP1B-201ENST00000250559 CXCL1P09341 107 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms