RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 ZNF674Q2M3X9 581 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 SSX9Q7RTT3 188 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 OR10G9Q8NGN4 311 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 OR10G7Q8NGN6 311 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 CELSR1Q9NYQ6 3014 aa17.71■□□□□ 0.43
HOXC8-201ENST00000040584 A0A1W2PPI3 338 aa17.7■□□□□ 0.42
HOXC8-201ENST00000040584 AVPP01185 164 aa17.7■□□□□ 0.42
HOXC8-201ENST00000040584 OPN1MWP04001 364 aa17.7■□□□□ 0.42
HOXC8-201ENST00000040584 OPN1MW2P0DN77 364 aa17.7■□□□□ 0.42
HOXC8-201ENST00000040584 OPN1MW3P0DN78 364 aa17.7■□□□□ 0.42
HOXC8-201ENST00000040584 MDKP21741 143 aaPredicted RBP17.7■□□□□ 0.42
HOXC8-201ENST00000040584 MINOS1Q5TGZ0 78 aa17.7■□□□□ 0.42
HOXC8-201ENST00000040584 SSX7Q7RTT5 188 aa17.7■□□□□ 0.42
HOXC8-201ENST00000040584 DYNAPQ8N1N2 210 aa17.7■□□□□ 0.42
HOXC8-201ENST00000040584 GGACTQ9BVM4 153 aa17.7■□□□□ 0.42
HOXC8-201ENST00000040584 MINOS1-NBL1R4GNA1 71 aa17.7■□□□□ 0.42
HOXC8-201ENST00000040584 TRAV40A0A0B4J280 105 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 SAA4P35542 130 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 SPCS3P61009 180 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 PDPNQ86YL7 162 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 WASHC3Q9Y3C0 194 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 SMAD7O15105 426 aaKnown RBP17.69■□□□□ 0.42
HOXC8-201ENST00000040584 NPFFO15130 113 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 MPDU1O75352 247 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 MC5RP33032 325 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 POU2AF1Q16633 256 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 TMEM241Q24JQ0 296 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 ACOT6Q3I5F7 207 aaPredicted RBP17.69■□□□□ 0.42
HOXC8-201ENST00000040584 PDLIM3Q53GG5 364 aaPredicted RBP17.69■□□□□ 0.42
HOXC8-201ENST00000040584 RUSC1-AS1Q66K80 236 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 RHOVQ96L33 236 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 NPCDR1Q9BY65 106 aa17.69■□□□□ 0.42
HOXC8-201ENST00000040584 TBL2Q9Y4P3 447 aaKnown RBP17.69■□□□□ 0.42
HOXC8-201ENST00000040584 IGHV1-69DA0A0B4J2H0 117 aa17.68■□□□□ 0.42
HOXC8-201ENST00000040584 SRRM4A7MD48 611 aaKnown RBP17.68■□□□□ 0.42
HOXC8-201ENST00000040584 TIMM23O14925 209 aa17.68■□□□□ 0.42
HOXC8-201ENST00000040584 IGHV1-69P01742 117 aa17.68■□□□□ 0.42
HOXC8-201ENST00000040584 CXCL1P09341 107 aa17.68■□□□□ 0.42
HOXC8-201ENST00000040584 IGHV4-38-2P0DP08 117 aa17.68■□□□□ 0.42
HOXC8-201ENST00000040584 ERVK-16P61578 105 aa17.68■□□□□ 0.42
HOXC8-201ENST00000040584 FFAR4Q5NUL3 377 aa17.68■□□□□ 0.42
HOXC8-201ENST00000040584 ACSM6Q6P461 480 aa17.68■□□□□ 0.42
HOXC8-201ENST00000040584 FLYWCH2Q96CP2 140 aaKnown RBP17.68■□□□□ 0.42
HOXC8-201ENST00000040584 AJUBAQ96IF1 538 aa17.68■□□□□ 0.42
HOXC8-201ENST00000040584 SMCO3A2RU48 225 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 HRASP01112 189 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 CDX1P47902 265 aaPredicted RBP17.67■□□□□ 0.42
HOXC8-201ENST00000040584 TMEM177Q53S58 311 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 CYP2G1PQ6ZSU1 146 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 OSR1Q8TAX0 266 aaPredicted RBP17.67■□□□□ 0.42
HOXC8-201ENST00000040584 NOTCH2Q04721 2471 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 TRBV24-1A0A075B6N3 115 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 IGKV1D-33P01593 117 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 IGKV1-33P01594 117 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 CTAG1AP78358 180 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 CYB5R2Q6BCY4 276 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 BRD3OSQ6XYD6 125 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 OR4C13Q8NGP0 309 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 OR4A16Q8NH70 328 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 RITA1Q96K30 269 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 FAM210BQ96KR6 192 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 TMEM140Q9NV12 185 aa17.67■□□□□ 0.42
HOXC8-201ENST00000040584 KBTBD11O94819 623 aa17.66■□□□□ 0.42
HOXC8-201ENST00000040584 CD81P60033 236 aa17.66■□□□□ 0.42
HOXC8-201ENST00000040584 ZNF343Q6P1L6 599 aa17.66■□□□□ 0.42
HOXC8-201ENST00000040584 NANPQ8TBE9 248 aa17.66■□□□□ 0.42
HOXC8-201ENST00000040584 HARBI1Q96MB7 349 aa17.66■□□□□ 0.42
HOXC8-201ENST00000040584 ABCA1O95477 2261 aa17.66■□□□□ 0.42
HOXC8-201ENST00000040584 J3QLI3 93 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 OR9G9P0C7N8 305 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 B2MP61769 119 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 RPS16P62249 146 aaKnown RBP17.65■□□□□ 0.42
HOXC8-201ENST00000040584 KLF17Q5JT82 389 aaPredicted RBP17.65■□□□□ 0.42
HOXC8-201ENST00000040584 OR4A47Q6IF82 309 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 CFHR4Q92496 578 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 ZDHHC16Q969W1 377 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 SMIM7Q9BQ49 75 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 WDR83OSQ9Y284 106 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 URGCP-MRPS24S4R325 110 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 ELOA3CA0A087WX78 387 aaPredicted RBP17.65■□□□□ 0.42
HOXC8-201ENST00000040584 TGIF2-C20orf24A0A0A6YYL0 155 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 CD1BP29016 333 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 CCDC144NLQ6NUI1 221 aa17.65■□□□□ 0.42
HOXC8-201ENST00000040584 QTRT1Q9BXR0 403 aaKnown RBP17.65■□□□□ 0.42
HOXC8-201ENST00000040584 TRAV3A0A0B4J244 114 aa17.64■□□□□ 0.41
HOXC8-201ENST00000040584 C15orf62A8K5M9 175 aa17.64■□□□□ 0.41
HOXC8-201ENST00000040584 OOSP1A8MZH6 123 aa17.64■□□□□ 0.41
HOXC8-201ENST00000040584 IL6RP08887 468 aaPredicted RBP17.64■□□□□ 0.41
HOXC8-201ENST00000040584 CD24P25063 80 aa17.64■□□□□ 0.41
HOXC8-201ENST00000040584 RAB24Q969Q5 203 aa17.64■□□□□ 0.41
HOXC8-201ENST00000040584 SEC14L6B5MCN3 397 aa17.63■□□□□ 0.41
HOXC8-201ENST00000040584 CLN5O75503 358 aa17.63■□□□□ 0.41
HOXC8-201ENST00000040584 RELBQ01201 579 aa17.63■□□□□ 0.41
HOXC8-201ENST00000040584 DOK5Q9P104 306 aa17.63■□□□□ 0.41
HOXC8-201ENST00000040584 FLNAP21333 2647 aaKnown RBP17.63■□□□□ 0.41
HOXC8-201ENST00000040584 TEX15Q9BXT5 2789 aa17.63■□□□□ 0.41
HOXC8-201ENST00000040584 VENTXO95231 258 aa17.63■□□□□ 0.41
HOXC8-201ENST00000040584 S100PP25815 95 aa17.63■□□□□ 0.41
HOXC8-201ENST00000040584 NDUFA6P56556 154 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms