RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 LILRA1O75019 489 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 SLC25A48Q6ZT89 311 aaKnown RBP8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 C18orf12Q96KH6 178 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 MPZP25189 248 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 GTSCR1Q86UQ5 136 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 TMEM219Q86XT9 240 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 NOTCH4Q99466 2003 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 IGHV3OR16-8A0A075B7F1 116 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 OR4C46A6NHA9 309 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 STHQ8IWL8 128 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 DUX3Q96PT4 197 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 CMC4P56277 68 aaPredicted RBP8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 SLC50A1Q9BRV3 221 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 FAM215AQ9Y5M1 114 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 IGKV1D-17A0A075B6S4 117 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 FAM3BP58499 235 aaPredicted RBP8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 ZNF56Q15929 161 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 ZNF841Q6ZN19 808 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 Q96MF0 132 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 GSX1Q9H4S2 264 aaPredicted RBP8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 MDC1Q14676 2089 aaKnown RBP8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 FBLL1A6NHQ2 334 aaKnown RBP8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 BUB1B-PAK6H3BSN5 160 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 PHOX2AO14813 284 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 PRTN3P24158 256 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 HNRNPA3P51991 378 aaKnown RBP8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 CD81P60033 236 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 PAX8Q06710 450 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 TFF3Q07654 80 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 PRSS8Q16651 343 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 RNF125Q96EQ8 232 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 PGLYRP4Q96LB8 373 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 SLX1AQ9BQ83 275 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 GBF1Q92538 1859 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 ESPL1Q14674 2120 aa8.55□□□□□ -1.04
NIPAL3-201ENST00000003912 DUSP14O95147 198 aaKnown RBP8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 ZNF343Q6P1L6 599 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 OR10D4PQ8NGN7 298 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 TMEM167AQ8TBQ9 72 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 LOC389332A0A1B0GUA5 103 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 TMEM183BQ1AE95 376 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 FAM74A4Q5TZK3 123 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 LYPD2Q6UXB3 125 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 SDHCQ99643 169 aaPredicted RBP8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 GFI1Q99684 422 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 KIF26BQ2KJY2 2108 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 C5orf63A6NC05 138 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 SCGB1C2P0DMR2 95 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 PAX1P15863 534 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 RPL13AP40429 203 aaKnown RBP8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 ASIPP42127 132 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 DLX1P56177 255 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 SCGB1D4Q6XE38 83 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 SGK494Q96LW2 274 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 LINC01587Q99440 93 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 DIDO1Q9BTC0 2240 aaKnown RBP8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 TRBV6-6A0A0A6YYG2 114 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 H7C1H1 209 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 GGCTO75223 188 aaKnown RBP8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 HERPUD1Q15011 391 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 EFNB3Q15768 340 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 IGFL2Q6UWQ7 119 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 LINC00527Q9UJ94 153 aa8.54□□□□□ -1.04
NIPAL3-201ENST00000003912 F8VVB4 439 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 F8VWA3 439 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 NAPSAO96009 420 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 HLA-DQA1P01909 254 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 RNF224P0DH78 156 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 GCSHP23434 173 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 Q6P435 159 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 MED12Q93074 2177 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 A0A0B4J293 547 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 NMBP08949 121 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 OR8A1Q8NGG7 326 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 OR1P1Q8NH06 330 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 Q8TCH9 128 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 RCC1LQ96I51 464 aaKnown RBP8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 MUC6Q6W4X9 2439 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 WT1P19544 449 aaPredicted RBP8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 FAM71F2Q6NXP2 309 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 MAP1LC3AQ9H492 121 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 IGKV1D-8A0A087WSZ0 117 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 GATA4P43694 442 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 C5orf64Q2M2E5 130 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 C2orf83Q53S99 150 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 TEX38Q6PEX7 206 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 RNF114Q9Y508 228 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 PLXNA2O75051 1894 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 CBY3A6NI87 242 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 C9JCJ5 164 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 TMEM250H0YL14 139 aa8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 EIF3GO75821 320 aaKnown RBP eCLIP8.53□□□□□ -1.04
NIPAL3-201ENST00000003912 FANCMQ8IYD8 2048 aa8.52□□□□□ -1.04
NIPAL3-201ENST00000003912 CGAP01215 116 aa8.52□□□□□ -1.04
NIPAL3-201ENST00000003912 CD5P06127 495 aa8.52□□□□□ -1.04
NIPAL3-201ENST00000003912 FREM3P0C091 2139 aa8.52□□□□□ -1.04
NIPAL3-201ENST00000003912 BTF3P20290 206 aaKnown RBP8.52□□□□□ -1.04
NIPAL3-201ENST00000003912 LEPP41159 167 aa8.52□□□□□ -1.04
NIPAL3-201ENST00000003912 TCF24Q7RTU0 167 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms