RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Gm12887B1AVM1 119 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Plcxd2B2RXA1 340 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm20503G3UZK1 150 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 P01635 115 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Itgb2P11835 771 aaKnown RBP8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Cd79aP11911 220 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 H2-DMb1P35737 261 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Hist1h1dP43277 221 aaKnown RBP8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 PpoxP51175 477 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Pcbp4P57724 403 aaKnown RBP8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 RhobP62746 196 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr1133Q7TR44 313 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr804Q7TRH7 314 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 BC048562Q80ZQ7 204 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Cd200r5Q8BTP3 270 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Pgam5Q8BX10 288 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr1394Q8VET2 312 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr127Q8VF25 323 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr1462Q8VFW3 307 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Dgat2Q9DCV3 388 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Xcr1Q9R0M1 322 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm20489A2AGH5 449 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 2010106E10RikA2ANY3 279 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm10073E9Q3T0 114 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Nipsnap2O55126 281 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gpr12P35412 334 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Polr1dP97304 133 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 BtcQ05928 177 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Lpar5Q149R9 372 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Oas1bQ60856 376 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Vdac1Q60932 296 aaKnown RBP8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 CmahQ61419 577 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Bst1Q64277 311 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Hide1Q75VT8 222 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Zfp85Q7TMC9 473 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr923Q7TRB9 317 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Mpped1Q91ZG2 326 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Sec13Q9D1M0 322 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Dnase2bQ9QY48 354 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Cbln1Q9R171 193 aa8.37□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm21778A0A087WNP8 232 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 BC053393A0A0B4J1F6 192 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr284A0A0U1RP76 321 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Vmn1r224E9PWK2 298 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 B3galt1O54904 326 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Tnfrsf17O88472 185 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Mettl7a2Q5I0W6 244 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Jpt2Q6PGH2 190 aaKnown RBP8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr967Q7TRA6 310 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Wdr82Q8BFQ4 313 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm9881Q8BR56 211 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Amz1Q8BVF9 502 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Banf2Q8BVR0 90 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 TprkbQ8QZZ7 175 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr513Q8VFZ3 309 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Chrdl1Q920C1 447 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Vmn1r44Q9EQ47 310 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Prss8Q9ESD1 342 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 LenepQ9WVB6 61 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 HelzQ6DFV5 1964 aaKnown RBP8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Pglyrp3A1A547 347 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 5730507C01RikJ3QPX0 416 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm20877J3QPZ4 227 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr889L7N1Y6 314 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Ifna1P01572 189 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Hoxb2P0C1T1 354 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gnb4P29387 340 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Nkx2-2P42586 273 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Lhx4P53776 390 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Prrx2Q06348 247 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 G0s2Q61585 103 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Tas2r107Q7M725 308 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr1477Q7TQQ7 315 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Smad3Q8BUN5 425 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Vmn1r183Q8K3N5 305 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr720Q8VF37 316 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr206Q8VGP9 306 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Glrx2Q923X4 156 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Olfr642Q924X8 314 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Slc50a1Q9CXK4 221 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Tmem210Q9D2F0 147 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Arr3Q9EQP6 381 aa8.36□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Trav12d-3A0A075B6A4 115 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm44596A0A0N4SVA0 210 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm28729A0A1B0GSW2 409 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 4930435E12RikA6X8Z9 381 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm20458E9PXJ7 78 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Adamts17E9Q4D1 1122 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm2663F6R7E8 247 aaKnown RBP8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Pet117P0DJF2 80 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Timp3P39876 211 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Cks1bP61025 79 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 V1rd19Q3KNP5 305 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Pom121l2Q5SW25 972 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Smug1Q6P5C5 279 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Gm10334Q792Y8 246 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Cox14Q8BH51 57 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Poc1bQ8BHD1 476 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 Nfatc4Q8K120 901 aa8.35□□□□□ -1.07
Hmgb1-201ENSMUST00000085546 StradbQ8K4T3 418 aa8.35□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms