RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 OR2G3Q8NGZ4 309 aa14□□□□□ -0.17
PHGDH-232ENST00000641947 PARD6GQ9BYG4 376 aaPredicted RBP14□□□□□ -0.17
PHGDH-232ENST00000641947 UQCC1Q9NVA1 299 aa14□□□□□ -0.17
PHGDH-232ENST00000641947 ZNF705EA8MWA4 302 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-232ENST00000641947 IFNA4P05014 189 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 AREGP15514 252 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 TMEM11P17152 192 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 MAS1LP35410 378 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 PLGLAQ15195 96 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 ATP6V1FQ16864 119 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 C5orf64Q2M2E5 130 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 C2orf83Q53S99 150 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 COMMD7Q86VX2 200 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 WFDC11Q8NEX6 87 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 TAF15Q92804 592 aaKnown RBP eCLIP13.99□□□□□ -0.17
PHGDH-232ENST00000641947 A0A1W2PN81 502 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 TGFAP01135 160 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 OR13C7P0DN81 318 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 GATA3P23771 443 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 CHRNA7P36544 502 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 RAB11AP62491 216 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 ARSJQ5FYB0 599 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-232ENST00000641947 SLC25A24Q6NUK1 477 aa13.99□□□□□ -0.17
PHGDH-232ENST00000641947 SRSF12Q8WXF0 261 aaKnown RBP13.99□□□□□ -0.17
PHGDH-232ENST00000641947 PIFOQ8TCI5 191 aa13.98□□□□□ -0.17
PHGDH-232ENST00000641947 GNPNAT1Q96EK6 184 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-232ENST00000641947 P2RX4Q99571 388 aa13.98□□□□□ -0.17
PHGDH-232ENST00000641947 KIAA1456Q9P272 454 aa13.98□□□□□ -0.17
PHGDH-232ENST00000641947 ACTL6BO94805 426 aa13.97□□□□□ -0.17
PHGDH-232ENST00000641947 FGF7P21781 194 aa13.97□□□□□ -0.17
PHGDH-232ENST00000641947 MFAP2P55001 183 aa13.97□□□□□ -0.17
PHGDH-232ENST00000641947 NDPQ00604 133 aa13.97□□□□□ -0.17
PHGDH-232ENST00000641947 MLANAQ16655 118 aa13.97□□□□□ -0.17
PHGDH-232ENST00000641947 Q6ZRG5 221 aa13.97□□□□□ -0.17
PHGDH-232ENST00000641947 CIARTQ8N365 385 aaPredicted RBP13.97□□□□□ -0.17
PHGDH-232ENST00000641947 SCGB1C1Q8TD33 95 aa13.97□□□□□ -0.17
PHGDH-232ENST00000641947 CITED4Q96RK1 184 aa13.97□□□□□ -0.17
PHGDH-232ENST00000641947 FBXO7Q9Y3I1 522 aa13.97□□□□□ -0.17
PHGDH-232ENST00000641947 NCBP2LA6PVI3 153 aaKnown RBP13.96□□□□□ -0.17
PHGDH-232ENST00000641947 FAM106CPP0CH98 169 aa13.96□□□□□ -0.17
PHGDH-232ENST00000641947 BRS3P32247 399 aa13.96□□□□□ -0.17
PHGDH-232ENST00000641947 SNCAP37840 140 aa13.96□□□□□ -0.17
PHGDH-232ENST00000641947 DLK1P80370 383 aa13.96□□□□□ -0.17
PHGDH-232ENST00000641947 ERHP84090 104 aaKnown RBP13.96□□□□□ -0.17
PHGDH-232ENST00000641947 PXDC1Q5TGL8 231 aa13.96□□□□□ -0.17
PHGDH-232ENST00000641947 TREML4Q6UXN2 200 aa13.96□□□□□ -0.17
PHGDH-232ENST00000641947 Q8N9W7 124 aa13.96□□□□□ -0.17
PHGDH-232ENST00000641947 LRRC20Q8TCA0 184 aa13.96□□□□□ -0.17
PHGDH-232ENST00000641947 VSIRQ9H7M9 311 aa13.96□□□□□ -0.17
PHGDH-232ENST00000641947 MED9Q9NWA0 146 aa13.96□□□□□ -0.17
PHGDH-232ENST00000641947 WDR83OSQ9Y284 106 aa13.96□□□□□ -0.17
PHGDH-232ENST00000641947 SCAF4O95104 1147 aaKnown RBP13.96□□□□□ -0.18
PHGDH-232ENST00000641947 SAT2Q96F10 170 aaPredicted RBP13.96□□□□□ -0.18
PHGDH-232ENST00000641947 FAM103A1Q9BTL3 118 aaKnown RBP13.96□□□□□ -0.18
PHGDH-232ENST00000641947 GGACTQ9BVM4 153 aa13.96□□□□□ -0.18
PHGDH-232ENST00000641947 NPCDR1Q9BY65 106 aa13.96□□□□□ -0.18
PHGDH-232ENST00000641947 MEGF9Q9H1U4 602 aa13.96□□□□□ -0.18
PHGDH-232ENST00000641947 SMCO3A2RU48 225 aa13.95□□□□□ -0.18
PHGDH-232ENST00000641947 SSMEM1Q8WWF3 244 aa13.95□□□□□ -0.18
PHGDH-232ENST00000641947 PSMG3Q9BT73 122 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-232ENST00000641947 DMRT1Q9Y5R6 373 aa13.95□□□□□ -0.18
PHGDH-232ENST00000641947 MFSD2BA6NFX1 497 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 J3QLI3 93 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 BTNL8Q6UX41 500 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 CENPVQ7Z7K6 275 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-232ENST00000641947 ZNF114Q8NC26 417 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 FNDC4Q9H6D8 234 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-232ENST00000641947 PARP11Q9NR21 331 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 TLN2Q9Y4G6 2542 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 MDFIC2A0A1B0GVS7 189 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 CNIH1O95406 144 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 ATP5IP56385 69 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-232ENST00000641947 FXYD3Q14802 87 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 PVRIGQ6DKI7 326 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 ACSM6Q6P461 480 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 TMEM219Q86XT9 240 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 FAM213BQ8TBF2 198 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 MGST2Q99735 147 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 LSM4Q9Y4Z0 139 aaKnown RBP13.94□□□□□ -0.18
PHGDH-232ENST00000641947 TIMM9Q9Y5J7 89 aa13.94□□□□□ -0.18
PHGDH-232ENST00000641947 PRH1P02810 166 aa13.93□□□□□ -0.18
PHGDH-232ENST00000641947 CAMLGP49069 296 aa13.93□□□□□ -0.18
PHGDH-232ENST00000641947 ELLP55199 621 aaPredicted RBP13.93□□□□□ -0.18
PHGDH-232ENST00000641947 CX3CL1P78423 397 aa13.93□□□□□ -0.18
PHGDH-232ENST00000641947 CD69Q07108 199 aa13.93□□□□□ -0.18
PHGDH-232ENST00000641947 ASPHD1Q5U4P2 390 aa13.93□□□□□ -0.18
PHGDH-232ENST00000641947 HSPB9Q9BQS6 159 aa13.93□□□□□ -0.18
PHGDH-232ENST00000641947 HRH4Q9H3N8 390 aa13.93□□□□□ -0.18
PHGDH-232ENST00000641947 PFDN2Q9UHV9 154 aa13.93□□□□□ -0.18
PHGDH-232ENST00000641947 IGKV1OR2-108A0A075B7D4 117 aa13.92□□□□□ -0.18
PHGDH-232ENST00000641947 IGHV7-81A0A0B4J1V7 117 aa13.92□□□□□ -0.18
PHGDH-232ENST00000641947 SH2D7A6NKC9 451 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-232ENST00000641947 FSHBP01225 129 aa13.92□□□□□ -0.18
PHGDH-232ENST00000641947 RAB5CP51148 216 aa13.92□□□□□ -0.18
PHGDH-232ENST00000641947 ZNF616Q08AN1 781 aa13.92□□□□□ -0.18
PHGDH-232ENST00000641947 ANK3Q12955 4377 aaKnown RBP13.92□□□□□ -0.18
PHGDH-232ENST00000641947 GAMTQ14353 236 aa13.92□□□□□ -0.18
PHGDH-232ENST00000641947 AANATQ16613 207 aa13.92□□□□□ -0.18
PHGDH-232ENST00000641947 SSX7Q7RTT5 188 aa13.92□□□□□ -0.18
PHGDH-232ENST00000641947 BCL6BQ8N143 479 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms